Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi116g00018 ATGTATTCCCTTTCTACAAAAGTAGAAAATGAGATGCTGGAGGATGGCAAGTTCAATTGGATTCATGCTGTTGTTGATGCTTTGTGTTGGTCTTACAGTTTCAGTTCATGCACAGCGACAAACAGTAAGCATTTCCATCAGCTGTGCTTCATAAGTATTGATTGTGGTGGTCCAGAGAATTTTGAGTACACAGATGATACCACTGAAATAAAGTACAGCACAGATGGAGCATACATACAAACAGGGGTTAACAAGAACATTTCCTCTGAGTATGCATACCCAAAGAATTCCAATCTGCCATTACCACTGTCTGATCTCAGAAGTTTTCCTCAGGGAATGAGGAACTGTTACAGGTTACTAGCTGGAAGAAAAGGCAGTTTACATTTAATAAGGGCTTCATTCTTATATGGAAACTATGATGGAAAAAACAAACTTCCAGAATTTGATCTCTATGTTGGTGTCAATTTCTGGTCATCAGTGAAATTTAGAAATGCTTCGGAGGAAGTTACAATGGAAATAATCAGCAGGGCACAATCAGAGGTGACAAATGTTTGTCTTGTGAACAAGGGAGCAGGAACTCCTTTTATCTCAGCATTGGAACTTAGACCACTTAATAGTTCTATTTATAATACTGAGTTTGGGGAATCTGCTTCACTTTTACTTTTTAAACGATGGGACATTGCAGCACTCAATTTATCTGGGAGATATGAAGATGATATTTATGATAGAATTTGGACTCCATACAATTCCTCTTCCTGGGATTCTATCAGCAATTCCTCAACAATAAACGTCGATGGTGATGGCTATAAAGCACCAATTGAAGTCATCAGCAGTGCTGCTAGACCAAGGAATAACAGTGGTACTTTGGAATTTTCCTGGACCCCAGATGATCCAAATTGGAAATTTTATGTCTACATGTACTTTGCTGAAGTGGAGCGACTTCAGAAAACCCAACTGAGGAAATTCAATATATCCTGGAATGGATCTCCATTGATCGAATCATTTGTACCACGCTACTCGTATGCAACCACTCTTTCTAACTCAAAATCCTTGGTTGCAAATGAACATCGAATTTCTATACACAAAACAAAAGATTCAACTCTTCCACCCATTCTCAATGCAGTTGAGATTTTTGTAGTAAGACAGCTGGATGCACTTCCAACATTTGGGCATGATGTTGATGCCATGATGGACATAAAAGATAGTTACAAAGTTGAAAGAAATTGGGTGGGTGATCCATGTGAGCCAAAGAACTACACTTGGGAGGGCTTAAATTGCAACTACAGCACTTCATTTCCTCCTCGAATAATATCACTGAATCTAAGCTCAAGCAGTCTGAGTGGAATAATAACTCCTGCCATTTCCAATCTATCTTCGTTGGAATCTTTGGATTTAAGTGACAATAGCTTAACTGGACCAGTGCCTCAGTTTTTGGAAGCATTGATATCCCTTAAATATTTGAATTTACAGGGAAACCAACTTTCAGGTTATGTCTCAGACACTCTTCTAGAAAGATCAAAGGCTGGATTACTTACACTGAGGGTGGATGACCAAAATCTGTGTGACTCAGATACAAATGAAGAGATGAGTAGTAAGATAAACAAAGTAAGAACTGTATCATCAAAGAACTGGCAATACACGTATGCTGAAGTGTTGGACATCACCAGCAACTTTGAAATGGTCATTGGGAAGGGAGGATTTGGAACTGTGTATCGCGGTCACATGAATGATGGCAATGAAGTTGCAGTTAAGATGCTTTCTCCATCATCAGCTCAGGGGCCAAAGGAATTTCAGACTGAGGCCGAGCTCTTGATGACAGTTCATCACAAAATTTGGTATCCTTCATTGGTTATTGTGATGAAGATAACAAGATGGCACTCATATATGAATAAAAAGTCACATTGTTTGAGTTGGGAAAGGAGAATTCAGATAGCAATCGATGCCGCAGAGGAAGCTAAGATAGCGGATTTTGGCCTTTCCAAGGCGTTTAAGAATGACAACCAAAATGCAGAATCAGCGGTGATTCATGATGATGATAAAAAGCCAAAATCTACATTCATGGGCACAACAGGGTACCTTGACCCAGAGTACTACAAATTACGGAACTTGAATGAGAAAAGTGACATCTACAGCTTTGGAATTGTTCTATTGGAATTAATCACTGGTCGCCCTGCAGTATTAAAAGGCAATCCATCAATCCACATACTTGAGTGGTTAAGACCTGAGCTTGAAAGAGGGGACTTGAATAGAATTTTAGATCCAATGCTTGAAGGCCAATTTGATGGACGTTCTGGATGGAAAGCTTTAGGAATAGCAATGTCATGCACTGCATCACCCTCCATTCAGAGACCTACAATGAGTGTTGTGTTAGCAGAGCTAAAACAGTGTTTTAAAATGGAGTCGCCTAGTGATAGGGAAATATTTGTGGCCCCAAAACAATTCTACAGCGAATTTTGTAGTTCATCTGAAGCATATTCCATGGATAGTGAATCTATCACCTATCCTTATCCAAGGTAG 2517 0.3941 MYSLSTKVENEMLEDGKFNWIHAVVDALCWSYSFSSCTATNSKHFHQLCFISIDCGGPENFEYTDDTTEIKYSTDGAYIQTGVNKNISSEYAYPKNSNLPLPLSDLRSFPQGMRNCYRLLAGRKGSLHLIRASFLYGNYDGKNKLPEFDLYVGVNFWSSVKFRNASEEVTMEIISRAQSEVTNVCLVNKGAGTPFISALELRPLNSSIYNTEFGESASLLLFKRWDIAALNLSGRYEDDIYDRIWTPYNSSSWDSISNSSTINVDGDGYKAPIEVISSAARPRNNSGTLEFSWTPDDPNWKFYVYMYFAEVERLQKTQLRKFNISWNGSPLIESFVPRYSYATTLSNSKSLVANEHRISIHKTKDSTLPPILNAVEIFVVRQLDALPTFGHDVDAMMDIKDSYKVERNWVGDPCEPKNYTWEGLNCNYSTSFPPRIISLNLSSSSLSGIITPAISNLSSLESLDLSDNSLTGPVPQFLEALISLKYLNLQGNQLSGYVSDTLLERSKAGLLTLRVDDQNLCDSDTNEEMSSKINKVRTVSSKNWQYTYAEVLDITSNFEMVIGKGGFGTVYRGHMNDGNEVAVKMLSPSSAQGPKEFQTEAELLMTVHHKIWYPSLVIVMKITRWHSYMNKKSHCLSWERRIQIAIDAAEEAKIADFGLSKAFKNDNQNAESAVIHDDDKKPKSTFMGTTGYLDPEYYKLRNLNEKSDIYSFGIVLLELITGRPAVLKGNPSIHILEWLRPELERGDLNRILDPMLEGQFDGRSGWKALGIAMSCTASPSIQRPTMSVVLAELKQCFKMESPSDREIFVAPKQFYSEFCSSSEAYSMDSESITYPYPR 838
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi116g00018 838 ProSitePatterns Protein kinases ATP-binding region signature. 562 584 IPR017441 GO:0005524
Sebi116g00018 838 FunFam Leucine-rich repeat receptor-like kinase 391 523 - -
Sebi116g00018 838 Pfam Protein tyrosine and serine/threonine kinase 558 610 IPR001245 GO:0004672|GO:0006468
Sebi116g00018 838 Pfam Leucine rich repeat 438 494 IPR001611 GO:0005515
Sebi116g00018 838 Pfam Malectin-like domain 53 379 IPR024788 -
Sebi116g00018 838 PANTHER OS07G0107800 PROTEIN-RELATED 51 797 - -
Sebi116g00018 838 Gene3D Phosphorylase Kinase; domain 1 519 614 - -
Sebi116g00018 838 Gene3D - 227 380 - -
Sebi116g00018 838 Gene3D Transferase(Phosphotransferase) domain 1 643 810 - -
Sebi116g00018 838 SUPERFAMILY L domain-like 408 523 - -
Sebi116g00018 838 ProSiteProfiles Protein kinase domain profile. 484 781 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi116g00018 838 SUPERFAMILY Protein kinase-like (PK-like) 542 808 IPR011009 -
Sebi116g00018 838 Gene3D Ribonuclease Inhibitor 392 509 IPR032675 -
Sebi116g00018 838 Pfam Protein kinase domain 646 727 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi116g00018 Sebi-Chr116 426535 431455 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi116g00018 47 800 Receptor kinase-like Gene Family AT4G29180 47.150 0.0 707
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Sebi116g00018 Malectin_like 2.1e-108 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi116g00018 - - gmx:100793137 1127.08