Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi116g00015 ATGCCACCAAAATCAGAAAATGAGAGAAGGAAGAAGGAGAAAAAAGATGGCAAATTCAATTACATCATCCCATTGCTGGTGCTGTCTCTTGGTCTTACAGTTATAGTTCATGCACAGCAACAAATAGGCTTCATAAGCATTGATTGTGGTAATTCACAAAATAGTGGGTACACAGATGAGACTAAAATAAAGTACAGCTCAGATGCAACCTACATACAAACAGGGGTTAACAAGAACATCTCCTCTGAGTATGCATACCCAAACAATCCCATTCTACCACAAACACTCTCAGATCTCAGAAGTTTTCCTCAGGGAATTAAAAACTGTTACAGTTTAACAGCTGGAGGAAGAGGCAGTTTACATTTAATAAGGGCTTCCTTCTTGTATGGAAACTATGATGGAGAAAACAAACTTCCAGAATTTGATCTCTATGTTGGTGTCAATTTATGGTCAACAGTGAAATTTAGAAATGCTTCAGAGGAACTCACATTGGAAATAATTAGCATGGCACAATCAGATGTGACAAATGTTTGTCTTATGAACAAAGGAGCAGGAACTCCTTTTATCTCAGCATTGGAACTTAGACCACTTAATAGTTCTATTTATAATACTGAGTTTGGGGGATCTGCTTCACTGTTACTTTTCAAAAGGTGGGACATTGCAGCACTCAATGGAAGTGGTAGATATGAAGATGATATTTATGACAGAATTTGGTCTCCATACAATTCCTCTTCCTGGGATTCTATCAGCACTTCCTCTGAAATAAATCCCAATGGTGATGGCTATAGAGCACCATTTGAAGTCATTAGGACTGCTGCTACACCAAGTAATGACAATGGTAATTTGGAATTTTCCTGGACCCCAGATGATCCAAATTGGAAATTTTATGTCTACATGTACTTTGCTGAAGTGGAACAGCTTCAGAAAACCCAACTGAGGAAATTCAATATCTCCTGGAATGGATCTCCATTGATTGAATCATTTGTACCACGCCATTTGTATGCAACCACTCTTTCTAATTCAAAATCATTGGTGGCAAATGAACATAGAATTTCTATACACAAAACAAATGATGCAACCCTTCCACCTATTCTTAATGCAGTTGAGATTTATGTAGTAAGAGAGCTGGATGCACTTCCAACATTTGAACAAGATGTTGGTGCCATTATGGACATAAAAGAAAGCTATAGAGTTCAAAAAAATTGGGAAGGTGATCCATGTGAGCCAAAGAACTATGCTTGGGAGGGCTTAAAATGCAATTACAGCACTTCAATTCCTCCCCGAATTATATCACTGAATCTGAGTTCAAGCAGTTTGAGTGGAATAATAACTCCAGCCATTTCCAATCTCTCTTTGTTGGAATCTTTGGATTTAAGTGACAATAGCTTAACTGGATCAATACCTCAATTTTTGGAAGAACTGAAATCCCTTAAATATTTGGTGGATGAAAAGAATCTGAGTGCCTCAGATACAAGTAACAAAAAGAAAGTTGTGATTCCCATAGTCACAACATTATCAGCAGTTTTAGTTCTTTTGGTTATTTTCTTTCTCTTTAGGAGGCTTAGAAGAAATGGACAATCAGATGAGGAGATCAATATCCTCAACAAAAAAGGAGGAACTGTAGCATCAAAGAACTGGCAATACACTTATACTGAGGTCTTGGACATCACCAGAAACTTTGAAACAGTCATTGGGAAAGGAGGATTTGGAACTGTGTACAGTGGTCAGACGAAATATGGCCAACAAGTTGCAGTCAAAATGCTTTCTCCATCATCAACTCAGGGACCAAAGGAATTTCAAACTGAGGCTGAGCTCTTGATGACAGTTCATCACAAAAATTTGGTACCTTTCATTGGTTATTGTGATGAAGATAAAAAGATGGCACTCATATATGAGCATATGGCTAATGGCAACCTGAAAGATTATCTCTCTGATAGTAATCATTGCTTGAGTTGGGAAAGGAGGCTTCAGATAGCAATAGATGCCGCAGAGGGATTGGATTACCTACACCATGGATGCAGGCCACCTATAATACACAGGGATGTGAAAACATCCAACATTCTTTTAAGTCAAGACTTAGAAGCTAAGATAGCAGATTTTGGACTCTCCAAAGTGTTTAAGAATGAAAACCCAATTGCAGAATCTGCAATCATGGGCACCACAGGGTACCTTGACCCAGAGTGCTATAAATCAGGGGGCTTGAATGAGAAAAGTGACATCTATAGTTTTGGAATTGTTTTATTGGAATTGATCACAGGTCGCCCTGCAATAATAAAAGGCAATTCATCAATCCACATACTTCAGTGGTTAAGACCTGAGCTTGAAAGTAAGGACTTGAGTAGAATTTTAGATCCAAGGCTTGAAGGCGAATTTGATGCAAGTGCTGGATGGAAAGCTTTAGGAATAGCAATGGCATGCACTGGATCACCCTCTATTCAGAGACCAACAATGAGTGTTGTGGTAAGAGAGCTAAAACAGTGCATTAAAGAGGATTCATCTATGGCTATATCCCAACAGCCTAGTGATGGGGAAATATTTGTGGCACCAACACAGGTGTACAGCGAATTTTTTTGCAGTTCATCTGAAGCATATTCCTTGGATAGTGAATTTATCACCAATCCTGTCCCAAGATGA 2634 0.3861 MPPKSENERRKKEKKDGKFNYIIPLLVLSLGLTVIVHAQQQIGFISIDCGNSQNSGYTDETKIKYSSDATYIQTGVNKNISSEYAYPNNPILPQTLSDLRSFPQGIKNCYSLTAGGRGSLHLIRASFLYGNYDGENKLPEFDLYVGVNLWSTVKFRNASEELTLEIISMAQSDVTNVCLMNKGAGTPFISALELRPLNSSIYNTEFGGSASLLLFKRWDIAALNGSGRYEDDIYDRIWSPYNSSSWDSISTSSEINPNGDGYRAPFEVIRTAATPSNDNGNLEFSWTPDDPNWKFYVYMYFAEVEQLQKTQLRKFNISWNGSPLIESFVPRHLYATTLSNSKSLVANEHRISIHKTNDATLPPILNAVEIYVVRELDALPTFEQDVGAIMDIKESYRVQKNWEGDPCEPKNYAWEGLKCNYSTSIPPRIISLNLSSSSLSGIITPAISNLSLLESLDLSDNSLTGSIPQFLEELKSLKYLVDEKNLSASDTSNKKKVVIPIVTTLSAVLVLLVIFFLFRRLRRNGQSDEEINILNKKGGTVASKNWQYTYTEVLDITRNFETVIGKGGFGTVYSGQTKYGQQVAVKMLSPSSTQGPKEFQTEAELLMTVHHKNLVPFIGYCDEDKKMALIYEHMANGNLKDYLSDSNHCLSWERRLQIAIDAAEGLDYLHHGCRPPIIHRDVKTSNILLSQDLEAKIADFGLSKVFKNENPIAESAIMGTTGYLDPECYKSGGLNEKSDIYSFGIVLLELITGRPAIIKGNSSIHILQWLRPELESKDLSRILDPRLEGEFDASAGWKALGIAMACTGSPSIQRPTMSVVVRELKQCIKEDSSMAISQQPSDGEIFVAPTQVYSEFFCSSSEAYSLDSEFITNPVPR 877
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi116g00015 877 Gene3D Phosphorylase Kinase; domain 1 564 634 - -
Sebi116g00015 877 CDD STKc_IRAK 564 826 - -
Sebi116g00015 877 FunFam Leucine-rich repeat receptor-like protein kinase 536 633 - -
Sebi116g00015 877 ProSiteProfiles Protein kinase domain profile. 558 857 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi116g00015 877 Gene3D Ribonuclease Inhibitor 378 500 IPR032675 -
Sebi116g00015 877 FunFam Leucine-rich repeat receptor-like kinase 384 506 - -
Sebi116g00015 877 ProSitePatterns Protein kinases ATP-binding region signature. 564 586 IPR017441 GO:0005524
Sebi116g00015 877 SUPERFAMILY L domain-like 398 482 - -
Sebi116g00015 877 PANTHER OS07G0107800 PROTEIN-RELATED 45 828 - -
Sebi116g00015 877 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 634 836 - -
Sebi116g00015 877 Gene3D - 220 373 - -
Sebi116g00015 877 Gene3D Transferase(Phosphotransferase) domain 1 635 847 - -
Sebi116g00015 877 SMART serkin_6 558 828 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi116g00015 877 SUPERFAMILY Protein kinase-like (PK-like) 545 824 IPR011009 -
Sebi116g00015 877 Pfam Leucine Rich Repeat 453 474 IPR001611 GO:0005515
Sebi116g00015 877 Pfam Malectin-like domain 47 372 IPR024788 -
Sebi116g00015 877 ProSitePatterns Serine/Threonine protein kinases active-site signature. 677 689 IPR008271 GO:0004672|GO:0006468
Sebi116g00015 877 Pfam Protein tyrosine and serine/threonine kinase 560 771 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi116g00015 Sebi-Chr116 385844 392254 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi116g00015 22 828 Receptor kinase-like Gene Family AT4G29180 50.820 0.0 822
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Sebi116g00015 Malectin_like 2.6e-109 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi116g00015 - - gmx:100793137 1222.22