Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi116g00013 ATGGGAAGGGCTCCATGTTGTGACAAATCCAACGTGAAAAGAGGACCATGGTCTCCTCAAGAAGATGCCACCCTCAAAAACTACCTTGAGAAGCATGGCACTGGTGGTAATTGGATAGCTCTACCCCAAAAAGCAGGCCTTAAGCGTTGTGGGAAGAGCTGTCGTCTGAGATGGCTGAACTATCTTAGGCCTCATATCAAGCTTGGAGCTCAACTGCCTGGGAGAACAGACAATGATGTGAAAAATCACTGGAACACCAAGCTAAAGAAAAAGTTTTTGGCTGGATCAAACTCCAGTATTGCCACAAGCAACAATGGCAGTGTCAGCAACAAGACTAGTTGTTCTGATCATCATTTCTCAAATTTTACTCTTCCATCTCAATTTGAACCATTTGTCTTTGATCAAGGAAACAACACAGCTTGTTTTGACTCCCACAATGTTTTTGATTTGGGGCAAACACCAATTCCAGTTCCTTTACCAATGCCTCTGGAATCAGAAGCTTTTTATAATGGGAGCTGCAGCCAGATTAGTAGCTGTAGTACACCACCCACTAAGGAAGTTTCAATTCTTTCCAATGCAGAACAGAACAATCATAGCCAATGGTTTGGATATGACCATGAAGGTGAAGGTGATGCAATTTTGCTTGAATTTGTGCTTGATGATCTACTGAGTCATGGATTTGCTTCTCTAGACAAAAGCAACCAAGTTGCTCCAACTCCATCATCTGGGTAA 732 0.4262 MGRAPCCDKSNVKRGPWSPQEDATLKNYLEKHGTGGNWIALPQKAGLKRCGKSCRLRWLNYLRPHIKLGAQLPGRTDNDVKNHWNTKLKKKFLAGSNSSIATSNNGSVSNKTSCSDHHFSNFTLPSQFEPFVFDQGNNTACFDSHNVFDLGQTPIPVPLPMPLESEAFYNGSCSQISSCSTPPTKEVSILSNAEQNNHSQWFGYDHEGEGDAILLEFVLDDLLSHGFASLDKSNQVAPTPSSG 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi116g00013 243 Gene3D - 68 117 - -
Sebi116g00013 243 CDD SANT 16 88 IPR001005 -
Sebi116g00013 243 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 66 IPR017930 -
Sebi116g00013 243 SUPERFAMILY Homeodomain-like 14 89 IPR009057 -
Sebi116g00013 243 Pfam Myb-like DNA-binding domain 14 62 IPR001005 -
Sebi116g00013 243 Gene3D - 6 67 - -
Sebi116g00013 243 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 70 92 IPR017930 -
Sebi116g00013 243 PANTHER OS09G0431300 PROTEIN 70 138 - -
Sebi116g00013 243 ProSiteProfiles Myb-like domain profile. 9 62 IPR001005 -
Sebi116g00013 243 SMART sant 13 64 IPR001005 -
Sebi116g00013 243 FunFam Transcription factor RAX3 7 68 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi116g00013 Sebi-Chr116 355122 356345 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi116g00013 1 94 MYB Transcription Factor Family AT5G57620 64.706 2.23e-51 168
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Sebi116g00013 Myb_DNA-binding 1.8e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi116g00013 K09422 - gmx:778160 300.827