Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi116g00004 ATGGTCAGAAACAAGAAAAGGGAGATAACGCAACAGACATTTGTTTGTTTCAAGGAAGGCTTACGTCTAAAGAAGCATTTGAAGAAGGTACATCGCAAGCGAGAACCTAGAGCTTTGACAAGGTGTGGTTGTAAAGCCTTTATTCGTGTTAGTTTTGTGGGAGAAACTGCTCGATGGCAAGTGAAAGACTTCTTAGACACTCATATCTATGAGATGTTAGCTGCAAAATATATTGGAATTTCTCGGTACATAAAAATATGCATGAATGTGACGTTGTTCAAATGA 285 0.3825 MVRNKKREITQQTFVCFKEGLRLKKHLKKVHRKREPRALTRCGCKAFIRVSFVGETARWQVKDFLDTHIYEMLAAKYIGISRYIKICMNVTLFK 94
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi116g00004 94 Pfam FAR1 DNA-binding domain 4 72 IPR004330 -
Sebi116g00004 94 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 4 69 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi116g00004 Sebi-Chr116 66493 66777 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Sebi116g00004 FAR1 6.1e-12 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi116g00004 - - adu:110274949 77.4109