Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi1168g00001 GTAGTGAAGCCAAAAGCAGATTTTGCATCACTAGAGACAACAATACTTTATGCACTGCATATGAACACCAAACTTTCCCATGGTCCAATTCACTTCCATGCCCCTGCCAAGATATTCTGGCGCACTGTTCGTGGAATGATACCACATAAGACAAAGTGTGGGGGTTTGAAGGTTTATGAGGGAATCCCTCCTCCATATGACAAGATGAAGAGAATGGTTGTCCCTGATGCTCTCAAGGTGTTGAGGCTCCAGAAAGGACACAAGTACTGCCTGTTGGGTAGATTGTCATATGAGGTTGGATGGAACTACCATGACACCATCAGGTTTAAAGCATCAGAGGTGTTGGTTGCACTTGAATACTTTCACATGTTGGGGATAGTGTACCGTGATCTCAAGCTTGAGAGTGAAGATGCTTGCTCTCTTAAAGAATCAAAAATGCGCGTGCGTGAAGATAAGCCACTTAGAACACAAGGAATTCAATCCATATTCTCAAGACAAACATCAG 505 0.4356 VVKPKADFASLETTILYALHMNTKLSHGPIHFHAPAKIFWRTVRGMIPHKTKCGGLKVYEGIPPPYDKMKRMVVPDALKVLRLQKGHKYCLLGRLSYEVGWNYHDTIRFKASEVLVALEYFHMLGIVYRDLKLESEDACSLKESKMRVREDKPLRTQGIQSIFSRQTS 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi1168g00001 168 SUPERFAMILY Ribosomal protein L13 18 103 IPR036899 GO:0003735|GO:0005840|GO:0006412
Sebi1168g00001 168 SUPERFAMILY Protein kinase-like (PK-like) 103 134 IPR011009 -
Sebi1168g00001 168 PANTHER RIBOSOMAL PROTEIN L13 20 110 IPR005822 GO:0003735|GO:0005840|GO:0006412
Sebi1168g00001 168 Gene3D Ribosomal protein L13 9 103 IPR036899 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi1168g00001 Sebi-Chr1168 30879 32919 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi1168g00001 21 108 Cytoplasmic Ribosomal Protein Gene Family AT4G13170 80.645 7.86e-52 162
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi1168g00001 K02872 - mnt:21386595 164.851