LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Sebi1163g00004	ATGGAAGAAAATTGTTGGAACAACAATTATGAAGGATTCAATGCGACAACTGACTTTGAAAACGATGTAGAGATGGTTGATGTGACGGACAACCCTATGGAGGGGAGGACTGATTACTCTAACACTTTTACGACAAATGAGATATTTGGCAATCGAGATGAATTGTTGAAATGGGTTCGTGAAACAGGAAGGACACATGGTTTTGTTGTGGTTATTTTGAGGTCAGACGCGGGAGGGAATGGTCGGAAAACAACTCTAGTGTTGGGATGTGAAAGGAGTGGAAAGTATAAACCATACAAGAAAGAGTTGACCCGCAATGTTACAGGTGCAAAAAAATGTAGATGTCCTTTCAGGCTGAGAGGGAAACCAGTACATGTAGGTGATGGTTGGAGGCTTAATGTAGTTTGTGGTTATCACAACCATGATGTGGCAGAAAATTTGGAGGGTCATGCCTATGCTGGTCGTTTGACTACTAATGAGTTGTCCTTACTTAATGACATGACGAAGAACATGGTAAAGCCAAGGAATATCTTACTGACATTGAAGGATCACAATAAGGATAATGTGACCACCATCAAGCAGATTTATAATGCTCGACAGGCCTTTCGATCAGCACTAAGGGGTCCTCGGACAGAGTTTCAAAACTTGATGAAGTTAATGGACAGAGATAACTATGTATATTGGCATAGAAGGCATGAAGACTCTGATGTTGTTAGAGACATTGTATGGACACATCCGGATGCAATGAAATTGCTAAATATATTTCATATTGTGTTAATTATCGACACCACATACAAAACCAACAAATACAAGTTGCCATTGCTTGAGGTTGTTGGTGTTACTTCAACTGAACTCACCTTTTCAGTGGCCTTTGCTTACATTGAGCAAGAAAAAACAGATAACTTCATGTGGGTTTTAGAGAAAATAAGAAGCATGATTCTTGTGCCTGATGTGTCACCTAAGGACTTATGTGAATCATACCTGGCTCATGCCCCACAAAGAAAAGTTTGTAGATGCATGGATCAATAA	1029	0.3984	MEENCWNNNYEGFNATTDFENDVEMVDVTDNPMEGRTDYSNTFTTNEIFGNRDELLKWVRETGRTHGFVVVILRSDAGGNGRKTTLVLGCERSGKYKPYKKELTRNVTGAKKCRCPFRLRGKPVHVGDGWRLNVVCGYHNHDVAENLEGHAYAGRLTTNELSLLNDMTKNMVKPRNILLTLKDHNKDNVTTIKQIYNARQAFRSALRGPRTEFQNLMKLMDRDNYVYWHRRHEDSDVVRDIVWTHPDAMKLLNIFHIVLIIDTTYKTNKYKLPLLEVVGVTSTELTFSVAFAYIEQEKTDNFMWVLEKIRSMILVPDVSPKDLCESYLAHAPQRKVCRCMDQ	342

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Sebi1163g00004	342	PANTHER	MALONATE-SEMIALDEHYDE DEHYDROGENASE	86	204	IPR010061	GO:0004491
	Sebi1163g00004	342	Pfam	MULE transposase domain	258	312	IPR018289	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Sebi1163g00004	Sebi-Chr1163	63499	64929	Transposed

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	FAR1	Sebi1163g00004		MULE	1.1e-12	CL0219

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Sebi1163g00004	-		-	gmx:100782358	356.295