Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi1160g00002 ATGAAGAAGCTCAAAGGGGAAGCTTCCAAACCATTTCAGGCTACACTTGCATCAACACTTGCATTTTCTATGGGTGCTTTGGTGCCACTGTTAGCTGCTGTGTTTACGAGGATTCACAAGATAAGGATGGGAGTTGTTGCTGCTATGGCTAGTTTGGCTTTGTTGGTGTTTGGAGGGGTTGGAGCAGTGCTTGGAAAGACTCCAGTGAGGAGATCTTGTGTTAGA 225 0.4622 MKKLKGEASKPFQATLASTLAFSMGALVPLLAAVFTRIHKIRMGVVAAMASLALLVFGGVGAVLGKTPVRRSCVR 75
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi1160g00002 75 PANTHER FE(2+)/MN(2+) TRANSPORTER PCL1 5 75 IPR008217 GO:0005384|GO:0030026
Sebi1160g00002 75 Pfam VIT family 7 75 IPR008217 GO:0005384|GO:0030026
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi1160g00002 Sebi-Chr1160 31565 31789 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi1160g00002 1 75 Nodulin-like Gene Family AT3G43660 51.852 1.11e-20 79.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi1160g00002 K22736 - gmx:100802489 94.7449