Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi115g00026 ATGGCTCTCAGAGATGAAGATGCGCAACACCACTCTCCTTCATTCCTTGATGCCCTTCTCTGTGAAGAGCAAGATACCTTTGAAGAAGATCTTGATGATGCAAACGGTTCTGAGGTTGAGACCAATACCCATGACCCTTCTGCTAGAAAGTTGCAATCTTTGCCCTTGGTTTTGCTGGACAATGACGTGTTCTGGGAAGATGATGAGCTTGTCTCCTTAATCTCAAAAGAGGGAGAAGAAACCCATTGTCTGCTCAGGGATAAGCCATGGATGACACAGCTCACTGCTGTTGCTTGTTTGTCCCTTGCTGCCAAAGTGGAAGAGACTCATGTGCCACTTCTTTTAGACCTGCAAGTGGAGGAATCAAGATTTGTGTTTGAAGCAAAGACTATACAGAGAATGGAGCTTCTAGTATTGTCGACTCTTAAATGGAAGATGCATCCTGTGACCCCAATTTCCTTCTTTGAACACATTGTTAGAAGGCTTGGTTTAAAGAGTCGCTTGCATTGGGAGTTCCTTTGGCGTTGTGAGAGAGTTCTTCTCAATGTCATTGCGGATTCAAGGGTTATGAGTTATCTTCCTTCTACATTGGCTGCTGCTACAATGATCCATGTTATTAAAGAGATTGAGCCATTTAATGCAACTGAGTACATTGATCAACTTCTCAGTTTACTGAAGATTAGCGAGGAACAACTGAACAAGTGCTACAAACTCATACTGAAACTAGTAGTTTGCCATGAAGGCATTTACAATCTTAACCAGAAACGCAAGCGCCTATCTGAACCAAGTAGCCCAGGTGGTGTCATAGATGCATCTTTTAGTTGTGACAGCTCAAATGATTCATGGACTATGGCATCACCATTCTCACTTCCACCGGAGCCACTGCTTAAGAGGAGAAGAGCTCAGGACCAGCAGATGCGGTTGCCTTTGGTTAATCGTGTGTCCATTGATGTTCTTAATAGCCCTTGTTAA 972 0.4352 MALRDEDAQHHSPSFLDALLCEEQDTFEEDLDDANGSEVETNTHDPSARKLQSLPLVLLDNDVFWEDDELVSLISKEGEETHCLLRDKPWMTQLTAVACLSLAAKVEETHVPLLLDLQVEESRFVFEAKTIQRMELLVLSTLKWKMHPVTPISFFEHIVRRLGLKSRLHWEFLWRCERVLLNVIADSRVMSYLPSTLAAATMIHVIKEIEPFNATEYIDQLLSLLKISEEQLNKCYKLILKLVVCHEGIYNLNQKRKRLSEPSSPGGVIDASFSCDSSNDSWTMASPFSLPPEPLLKRRRAQDQQMRLPLVNRVSIDVLNSPC 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi115g00026 323 FunFam CYCLIN D32 148 237 - -
Sebi115g00026 323 Pfam Cyclin, N-terminal domain 91 146 IPR006671 -
Sebi115g00026 323 SMART Cyclin_C_2 149 277 IPR004367 -
Sebi115g00026 323 Gene3D - 88 147 - -
Sebi115g00026 323 CDD CYCLIN_AtCycD-like_rpt2 149 239 - -
Sebi115g00026 323 Gene3D - 148 237 - -
Sebi115g00026 323 Pfam Cyclin, C-terminal domain 149 247 IPR004367 -
Sebi115g00026 323 SUPERFAMILY Cyclin-like 86 147 IPR036915 -
Sebi115g00026 323 PANTHER CYCLINS 90 244 IPR039361 -
Sebi115g00026 323 SUPERFAMILY Cyclin-like 150 249 IPR036915 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi115g00026 Sebi-Chr115 1550362 1551851 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi115g00026 1 313 Core Cell Cycle Gene Families AT5G67260 45.968 1.44e-90 274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi115g00026 K14505 - gmx:100785030 501.516