Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi115g00009 ATGGAGGTGGTGCAGAATGAGGTTGGAACAGCGGAGGCGAAGGTAAGGAAGATGGAGGAGGCGCATAAGAGTGGGAAGTTGGTGTTCTGCTGCGGGGAGGGGAAGTGTGGGGACCACTTACAAGGCAGTTCTGGATTCGCAGCTGATTGTGACGGTGAAGAGGATGGATGCCGGAAAAACTGCGGTGACCAGCGGGGAAGTTTTCGAAGGCACATGGAGATGGTGGGAAGGCTTCGCCACCCTAATTTGGTTCCGTTAAGGGCTTATTTTCAGGCCAAGGGAGAGAGGCTCGTCATCTATGATTATCAACCCAATGGGAGCCTCTTCAACCTCGTTCATGGTTCAAAATCAGCGAGGGCCAAGCCCCTGCATTGGACATCATGCTTAAAAATAGCCGAAGATGTAGCACATGGACTTGCTTATATACACCAAGCTTCGTCTTTAATTCATGGCAACCTTAAATCCTCTAATGTCCTTCTTGGAGTGGACTTTGAAGCTGTAATTACAGACTATAGTTTGGCCTTCCTTGCAGAGTCTTCAATCTGTGAAGATCCTGATTCTGCAGCCTATAAAGCACCAGAGGCTCGCAAGTCTAACCGTAGGGCCACTTCAAAGTCTGATGTGTATGCTTTTGGTGTGCTACTATTGGAGCTTTTGACGGGTAAACATCCTTCACAACATCCTTTCCTTGCGCCAACGGATTTGCAAGATTGGGTTAGAGCAATGAGGGATGATGATGTTAGTGAAGACAACCGGCTTGAAATGCTCACAGAGGTTGCCAGTATTTGCAGTGCAACCTCGCCAGAACAGAGGCCAGCAATGTGGCAAGTACTTAAGATGATACAGGGAATAAAGGATAGTATTGCGATGGAGGACACACTTAACGGACTCTCATAG 897 0.4816 MEVVQNEVGTAEAKVRKMEEAHKSGKLVFCCGEGKCGDHLQGSSGFAADCDGEEDGCRKNCGDQRGSFRRHMEMVGRLRHPNLVPLRAYFQAKGERLVIYDYQPNGSLFNLVHGSKSARAKPLHWTSCLKIAEDVAHGLAYIHQASSLIHGNLKSSNVLLGVDFEAVITDYSLAFLAESSICEDPDSAAYKAPEARKSNRRATSKSDVYAFGVLLLELLTGKHPSQHPFLAPTDLQDWVRAMRDDDVSEDNRLEMLTEVASICSATSPEQRPAMWQVLKMIQGIKDSIAMEDTLNGLS 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi115g00009 298 Coils Coil 1 21 - -
Sebi115g00009 298 Gene3D Transferase(Phosphotransferase) domain 1 32 289 - -
Sebi115g00009 298 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 61 286 IPR046959 -
Sebi115g00009 298 Pfam Protein tyrosine and serine/threonine kinase 63 279 IPR001245 GO:0004672|GO:0006468
Sebi115g00009 298 ProSiteProfiles Protein kinase domain profile. 25 284 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi115g00009 298 SUPERFAMILY Protein kinase-like (PK-like) 62 286 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi115g00009 Sebi-Chr115 817488 819092 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi115g00009 68 292 Receptor kinase-like Gene Family AT3G50230 63.319 1.43e-101 310
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Sebi115g00009 PK_Tyr_Ser-Thr 1.9e-27 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi115g00009 - - gmx:100783086 452.595