Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi115g00008 ATGGCTGCTTGCTTGGAGCAGGGTTCCTTAAGTAGGGCAACAGGAAGTACAAATATGAACAGCCAGTCCAGTCGATCACATGCAATCTTCACAATTACATTAGAACAGATGCGCAAACTTCATTCAGTTTCTCCCAGCAATGACAGTTCGGATGAGGATATGGGTGAAGAATACCTTTCAGCAAAGCTCCATTTGGTGGATCTAGCTGGATCTGAGCGAGCTAAAAGAACTGGTTCTGACGGTCTTCGTTTAAAAGAAGGTATACACATTAATAAAGGTCTTCTTGCACTCGGTAATGTCATAAGTGCACTAGGGGATGAGAAAAAGCGAAAGGAGGGTCTACATGTCCCTTACCGGGATAGCAAGCTCACTCGACTCTTACAGGATTCACTTGGTGGAAACAGCAAAACTGTTATGATAGCTTGCATTAGCCCTGCTGACGTCAATGCTGAGGAAACTCTTAATACCCTCAAGTATGCGAACCGTGCACGCAATATTCAAAATAAGCCTGTTGCTAATCGAGATTTGATATCCAATGAGATGCAGCAAATGCGCCAGCAGTTAAAATACTTGCAGGCTGAGCTCTGTTCACGGGGAGGAGCTCCGACTGATGAAGTGCGGGTTCTTAAGGAAAGGATTGCTTGGCTTGAGGCAACTAATGAGGAACTCTGTCGAAAGCTTCATGAATATCGCAGTAGATGTGCTTTTGTAAAGAGATGTGAAATTGATGAACCAGATGAACATATTTATCTCATCAAAACTGATGGACTTGAGAGGCGCTTTCAGAGCTCAGATTCATCTGACCATCCCATGGCTGGAAGTATATCAGGTGAGGATTCAAGGGAAACTGATGAAGCAGCAAAAGAGTTGGAGCATGCACTATTGCAAAATACCATGGATAAAGAGATGCATGAATTAAATAAGCGCTTGGAGCAGAAAGAGTCTGAGATGAAGCTCATTGGAGTTGATACTGAAACACTCAAACAGCACTTTGGGAAGAAAATTATGGAACTTGAGGAAGAGAAAAGAAAAGTTCAGCTAGAAAGGGACCGTTTGTTGCATGAAGTAGAGAATCTTGCTGCTAATTCAGATGGACTAGCACATAAAACTCAAGATGTTCGTGGCCAAAAATTGAAAGCATTGGAAACACAGATTTTAGACCTCAAAAAGAAACAAGAAAATCAGGTGCAGCTGCTGAAGCAAAAGGAGAAGAGTGAAGAAGCTGCAAAAAGACTGCAGGCTGAGATACAGTATATCAAGGCTCAAAAGGTTCAGTTGCAGCATAAAATGAAGCAAGAGGCAGAACAATTTCGACAATGGAAGGCTTCTCGTGAGAAGGAGTTACTCCAGGTTCTTCAAAGGAAGACAGAGGAAGCAACAATGGCTACGAAAAGGCTAAAAGAATTATTGGAAGCTCGCAAATCTTCTCCACGTGACAACTCTGTTTATTCAAATGGACATCTACAGTCTGGGCAGGTCAATGAAAAATCTCTCCTGAGGTGGCTTGATCAGGAGCTGGAGGTCATGGTACATGTGCATGAAGTTCATGCTGAATTTGACAAACAAAACCAAGTCCAAGCTGCACTGGAAGAAGAGTTGGCTTTCCTGAAACAAGTGGATAAGTTTTCAGATGGGCAGAGCATCCCCACAGGAAAGAGCAGATATTCGAGACTGTTATCCATGTCACCGGATGTAAAAGCTGCTAGAATAGCTTCTCTAGAGAACATGCTGGGCATGTCTTCAGTTGCTTTGAAAGCCATGACTTCACAACTTACTGAGGCAGAAGAAAGGGAACGCACATTAAATAACCGTGGACGTTGGAACCAGTTACGCTCAATGGGAGATGCAAAGAATGTGCTCCAGTATCTGTTCAATGCTACAGCAGAAGCAAGGTGCCAATTGTTGGAAAAAAATATGGAACTGAAGGACTTTAAAGAGCAACTTAATGAGCTTGTGACACTACTACAACAAAGTGAAGCACAGAGAAAAGAACTTGTAAAGGAGAAAACAATTAGGGAGCAAGCCGTTGCCATCACATTGACTACATCAGCATCGGAAAACTCACGGTCCTTGAAACACCTTGCGGATGAAATGAGTGGCCCATTGTCTCCAATGTCACTTCCTGCACCAAAACAACTCAAATTCACCCCTGGAGTTGTTAATGGATCAATCAGGGAGTCAGCTACATTTTTAGATGAAGCACGGAAGATGATACCCATTGGAGACTTGTCAACAAAGAGACTAGCAGCTATGGGACAAGCCGGAAAACTTTGGAGGTGGAAGAGAAGTCATCATCAATGGCTGATACAGTTTAAATGGAAGTGGCAGAAGCCCTGGAAACTCTCAGAATGGATCAAACACAGTGATGAAACAATCATGAGGTCAAGGCCTCGAGCACAAGCTTTGCTTAATGTGATGTGA 2421 0.4308 MAACLEQGSLSRATGSTNMNSQSSRSHAIFTITLEQMRKLHSVSPSNDSSDEDMGEEYLSAKLHLVDLAGSERAKRTGSDGLRLKEGIHINKGLLALGNVISALGDEKKRKEGLHVPYRDSKLTRLLQDSLGGNSKTVMIACISPADVNAEETLNTLKYANRARNIQNKPVANRDLISNEMQQMRQQLKYLQAELCSRGGAPTDEVRVLKERIAWLEATNEELCRKLHEYRSRCAFVKRCEIDEPDEHIYLIKTDGLERRFQSSDSSDHPMAGSISGEDSRETDEAAKELEHALLQNTMDKEMHELNKRLEQKESEMKLIGVDTETLKQHFGKKIMELEEEKRKVQLERDRLLHEVENLAANSDGLAHKTQDVRGQKLKALETQILDLKKKQENQVQLLKQKEKSEEAAKRLQAEIQYIKAQKVQLQHKMKQEAEQFRQWKASREKELLQVLQRKTEEATMATKRLKELLEARKSSPRDNSVYSNGHLQSGQVNEKSLLRWLDQELEVMVHVHEVHAEFDKQNQVQAALEEELAFLKQVDKFSDGQSIPTGKSRYSRLLSMSPDVKAARIASLENMLGMSSVALKAMTSQLTEAEERERTLNNRGRWNQLRSMGDAKNVLQYLFNATAEARCQLLEKNMELKDFKEQLNELVTLLQQSEAQRKELVKEKTIREQAVAITLTTSASENSRSLKHLADEMSGPLSPMSLPAPKQLKFTPGVVNGSIRESATFLDEARKMIPIGDLSTKRLAAMGQAGKLWRWKRSHHQWLIQFKWKWQKPWKLSEWIKHSDETIMRSRPRAQALLNVM 806
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi115g00008 806 Coils Coil 174 194 - -
Sebi115g00008 806 MobiDBLite consensus disorder prediction 9 25 - -
Sebi115g00008 806 SMART kinesin_4 1 174 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Sebi115g00008 806 Coils Coil 584 604 - -
Sebi115g00008 806 Coils Coil 206 226 - -
Sebi115g00008 806 Gene3D Kinesin motor domain 1 204 IPR036961 -
Sebi115g00008 806 ProSiteProfiles Kinesin motor domain profile. 1 166 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Sebi115g00008 806 PRINTS Kinesin heavy chain signature 17 34 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Sebi115g00008 806 PRINTS Kinesin heavy chain signature 116 137 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Sebi115g00008 806 PRINTS Kinesin heavy chain signature 62 80 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Sebi115g00008 806 MobiDBLite consensus disorder prediction 261 285 - -
Sebi115g00008 806 Coils Coil 296 316 - -
Sebi115g00008 806 ProSitePatterns Kinesin motor domain signature. 61 72 IPR019821 GO:0003777|GO:0005524|GO:0007018
Sebi115g00008 806 Coils Coil 641 668 - -
Sebi115g00008 806 Pfam Kinesin motor domain 3 166 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Sebi115g00008 806 Coils Coil 452 472 - -
Sebi115g00008 806 Coils Coil 378 429 - -
Sebi115g00008 806 Coils Coil 328 362 - -
Sebi115g00008 806 PANTHER CHROMOSOME-ASSOCIATED KINESIN KIF4A-RELATED 1 795 IPR027640 GO:0003777|GO:0007018
Sebi115g00008 806 MobiDBLite consensus disorder prediction 1 25 - -
Sebi115g00008 806 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 3 197 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi115g00008 Sebi-Chr115 805942 815374 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi115g00008 5 199 Calmodulin-binding Proteins AT5G65930 42.564 9.25e-36 144