Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi1157g00001 ATGAGTTTTGGAGGGTTTCTTGACAACAACAAGCAAGGTGGTGGAGGTGCTAGCATAATAGCAGATATTCCATACAACAACAATAGCATCAGCAACGATAGAATGCCCTCTAGTGCAATCTCACAGCCTCGTTTAGCCACTCCTACTTTAGCCAAATCCATGTTCAACTCACCTGGTCTTTCTCTGGCACTTCAAACAAATATAGATGGACAAGGGGATGTGAACAGATTAATGCCAGAGAATTTTGAGCAAAATGGTTTGAGAAGGAACAGAGAAGAAGAGCATGAAAGCAGATCTGGTAGTGATAATATGGATGGTGCTTCTGGTGATGATTTTGATGCTGCCGACAATCCACCAAGAAAAAAGCGTTATCACCGACACACTCCTCAGCAAATACAAGAACTTGAAGCGTTGTTCAAGGAGTGTCCTCACCCAGATGAGAAGCAAAGGCTTGAACTGAGTAAAAGGCTATGCTTGGAAACAAGGCAGGTGAAGTTTTGGTTCCAAAATAGAAGAACACAAATGAAGACTCAATTGGAACGCCATGAGAACACACTGCTTAGGCAAGAGAATGATAAACTCAGAGCTGAGAACATGTCTATGAGGGAAGCTATGAGGAATCCCATGTGTTCAAATTGTGGAGGTCCAGCTATGATTGGTGAGATTTCACTTGAAGAACAACATCTTAGGATTGAGAATGCTAGATTGAAAGATGAACTAGACAGAGTTTGTGCACTTGCTGGGAAATTTTTGGGTCGCCCCATTCCTTCATTAACAAGCTCAATTGGCCCTCCATTGCCAAATTCAAGTTTAGAGCTTGGAGTTGGGAGCAATGGTTTTGGTGGATTGAACACTAGTGTCCCTTCAACATTGCCTTTGGGTCCTGATTTTGGGATATCAAGTCCTTTAGGCATGGTGTCACCACCACCTCAAACAAGACCAACAACAACTGGCTTTGACAGATCAGTGGAAAGATCAATGTTTCTAGAGCTAGCTTTATCTGCAATGGATGAGTTGGTTAAGATGGCTCAAACTGGGGAGCCTCTTTGGATCAGGAGTTTAGAAGGGGGAAGAGAAATTCTCAACCAAGAGGAATACACAAGGACAATGACTCCTTGCATTGGTTTGAGACCAAATGGTTTTGTCTCAGAGGCTTCTAGAGAAACTGGTATGGTCATTATTAACAGCTTGGCCCTTGTTGAGACTTTAATGGACTCAAATCGATGGTCAGAGATGTTCCCTTGTATGATTGCAAGAACCTCCACCACTGAAGTCATATCTAATGGAATAAATGGAACCAGAAATGGTGCCCTTCATCTTATGCATGCTGAACTTCAAGTCCTTTCTCCCTTGGTTCCTGTTCGTGAGGTCAATTTTCTACGGTTTTGTAAGCAGCACGCAGAAGGGGTATGGGCAGTGGTAGATGTGTCAATAGATACCATCCGAGAAACTTCTGGTGCACCGACTTTTGTGAACTGTAGGAGACTTCCTTCTGGTTGTGTGGTGCAAGATATGCCAAATGGTTACTCTAAGGTGACATGGGTGGAGCATGCAGAATATGATGAAAGCCAAGTCCACCAGCTCTATAGACCCTTGTTGAGCTCAGGCATGGGGTTTGGCGCACAACGTTGGGTTGCTATACTTCAACGCCAATGCGAATGCCTAGCAATCCTAATGTCCTCAGCACTTCCCTCTAGAGAACACTCAGCAATAAGTGCGGGTGGAAGGCGAAGCATGCTGAAGCTGGCACAGCGAATGACGAACAACTTCTGTGCAGGAGTGTGTGCATCAACGGTTCACAAATGGAACAAACTGAACAACAACAACAGCGTGGGAGAAGACGTGAGAGTAATGACAAGGAAGAGCGTGGACGATCCAGGTGAGCCTCCAGGGATCGTTCTCAGTGCAGCAACCTCCGTTTGGCTCCCCGTTTCTCCACACAGACTCTTCGATTTCCTCCGCGACGAGAGGCTTCGAAGCGAGTGGGACATACTCTCCAATGGTGGACCAATGCAAGAGATGGCTCACATTGCCAAAGGACAAGACCATGCCAACTGTGTCTCCCTTCTTAGAGCCAGTGAGACATGCACAGACGCTTCAGGGTCGCTTGTGGTGTACGCACCGGTAGATATTCCAGCAATGCACGTTGTTATGAACGGTGGTGACTCGGCTTACGTGGCGCTTCTGCCATCGGGGTTCTCTATTGTTCCTGATGGATCCGGGAGTGGCGGTGGTGAGAATAACGGCGGCGCGTCGCAGCAGAGAGCGAGTGGGTCCCTTCTGACGGTGGCTTTTCAGATACTTGTGAATAGCCTCCCCACGGCGAAGCTCACGGTGGAGTCAGTGGAGACGGTGAACAACCTAATCTCGTGCACTGTCCAGAAGATAAAAGCAGCACTTCGCTGTGACAGCTGA 2415 0.4683 MSFGGFLDNNKQGGGGASIIADIPYNNNSISNDRMPSSAISQPRLATPTLAKSMFNSPGLSLALQTNIDGQGDVNRLMPENFEQNGLRRNREEEHESRSGSDNMDGASGDDFDAADNPPRKKRYHRHTPQQIQELEALFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQLERHENTLLRQENDKLRAENMSMREAMRNPMCSNCGGPAMIGEISLEEQHLRIENARLKDELDRVCALAGKFLGRPIPSLTSSIGPPLPNSSLELGVGSNGFGGLNTSVPSTLPLGPDFGISSPLGMVSPPPQTRPTTTGFDRSVERSMFLELALSAMDELVKMAQTGEPLWIRSLEGGREILNQEEYTRTMTPCIGLRPNGFVSEASRETGMVIINSLALVETLMDSNRWSEMFPCMIARTSTTEVISNGINGTRNGALHLMHAELQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSIDTIRETSGAPTFVNCRRLPSGCVVQDMPNGYSKVTWVEHAEYDESQVHQLYRPLLSSGMGFGAQRWVAILQRQCECLAILMSSALPSREHSAISAGGRRSMLKLAQRMTNNFCAGVCASTVHKWNKLNNNNSVGEDVRVMTRKSVDDPGEPPGIVLSAATSVWLPVSPHRLFDFLRDERLRSEWDILSNGGPMQEMAHIAKGQDHANCVSLLRASETCTDASGSLVVYAPVDIPAMHVVMNGGDSAYVALLPSGFSIVPDGSGSGGGENNGGASQQRASGSLLTVAFQILVNSLPTAKLTVESVETVNNLISCTVQKIKAALRCDS 804
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi1157g00001 804 MobiDBLite consensus disorder prediction 85 101 - -
Sebi1157g00001 804 CDD homeodomain 120 178 IPR001356 GO:0003677
Sebi1157g00001 804 ProSitePatterns 'Homeobox' domain signature. 153 176 IPR017970 GO:0000981|GO:0006355
Sebi1157g00001 804 SUPERFAMILY Bet v1-like 582 797 - -
Sebi1157g00001 804 SUPERFAMILY Bet v1-like 323 554 - -
Sebi1157g00001 804 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 117 800 IPR042160 -
Sebi1157g00001 804 SMART START_1 330 554 IPR002913 GO:0008289
Sebi1157g00001 804 Gene3D - 392 550 IPR023393 -
Sebi1157g00001 804 Gene3D - 108 194 - -
Sebi1157g00001 804 ProSiteProfiles 'Homeobox' domain profile. 118 178 IPR001356 GO:0003677
Sebi1157g00001 804 Pfam START domain 330 554 IPR002913 GO:0008289
Sebi1157g00001 804 MobiDBLite consensus disorder prediction 82 128 - -
Sebi1157g00001 804 Coils Coil 172 207 - -
Sebi1157g00001 804 ProSiteProfiles START domain profile. 321 557 IPR002913 GO:0008289
Sebi1157g00001 804 Pfam Homeodomain 121 176 IPR001356 GO:0003677
Sebi1157g00001 804 CDD START_ArGLABRA2_like 325 553 - -
Sebi1157g00001 804 FunFam Homeobox-leucine zipper protein HDG1 108 194 - -
Sebi1157g00001 804 FunFam Homeobox-leucine zipper protein GLABRA 2 330 553 - -
Sebi1157g00001 804 SUPERFAMILY Homeodomain-like 104 178 IPR009057 -
Sebi1157g00001 804 SMART HOX_1 119 182 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi1157g00001 Sebi-Chr1157 33172 39395 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi1157g00001 1 804 Homeobox Transcription Factor Family AT3G61150 64.558 0.0 1021
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Sebi1157g00001 START 6.1e-57 CL0209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi1157g00001 K09338 - gmx:100783614 1397.1