Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi1153g00001 ATGAATGTGTGTTTTGAAAATTCTGAAGGCGGTGTTGTGTTTGAAAATGTCGATGACGATGGTGGAGGGGATAGTGGGTTTGCTCAGGAAAGTGCGCGTGAACAGGAAAGTGTTTGTGCTCAGGATAGTGGTGGTCCTTTCTTTTTTTATGATGAAAATTGGGGTACTTTCATAGTGGGTGAGGACTGGGAAGACAATGAGGTTGAAGATAATGTAGAAGAAGATGACGGGGACAAGATTGTAATTGCAACTGATGACGATTTTTTGAAGATGTGGAACCTTGGTTTTTTCAGCCCCCACGAAATAGAGAAGTATGAATTTACTAATATGGAGGTGGCTTATAATTTCTATTTTGAATATGGGAAAGCCAATGGTTTTGGTATTCGTAGGGGCAGAACACTGAGGAATAAAAGAACGTTGGAGGAGTATCAGAAGGAGTTTATGTGTTGTAGAGCTGGGGTCCGTGAGGATCGTGGTTTGAGAATGGAAGATAGAGTTCGTGAACCAAGACCTGAAACTAGGTGTGAGTGTGAGGCTAGATTTGTAGTTCATGTCAACAAATTTTCTGTGCGTTGGTATTGCATTTGCTTTGTTGATAAGCATAACCATGATTTGTTAGGTGTAGTGCATTGCAGTATGCTTCCTGTGTATAGAAAAATTTCTAAGTGTGATGTTCTCCAAATGAATAATATAATTAAGGTCGGTATTAGGCCACCCATCATATTTAGTTCATTTGCTAATCAGTCTGGTGGTTATGAGAAGATTGGCTTTAGGAAGAAAGATATGTATAACAAGATCAATGAGCAGAGGAGGAAGAATTGTTCAGATGCTAAAAGTGCTCTCCAATACCTTGGAGAGCTACGGTTAAGTGATGATAAGATGTATTTTGAACACACTGTGGATGCCGAAGGTAGGCTACAACATCTTTTCTGGAGTGATGGTATGAGTCAAGTTGATTACAAGTTATTTGGGGAAGTGTTGGCATTTGATGCAACTTATGGTGTAAATAATCATAATCATTCCACGATTTTTGCTGCTGCCATTATTGCCAACGAGACGGAGGAGACCTATGTTTGGCTATTGGAGCAGTTTTCAAAAGCAATGAAAGGTAAATTGTCGAATGCTGTAATAACTGATGGTGATTTAGCTATGAAAAATGCCATTGAAAGGGTCTTCCCCAATGCTTATCATCGTCTGTGTGCTTGGCACCTGATGAGAAATACAACATCTAATGTAAAAAATGCTGATTTCACTAAATCATTTGAGAAATGCATGCTTGGGTATTATGATGTTGGGACATTTAGGAAGAAGCGGTGTGAATTGGTTGCAACTTTTGGAGTTGAAGAAAATCCTTGGGTGATAAGTATATATGAAAAGAGGACAATATGGGCAACGGCTTATCTACGTGGCAAATTTTTTGGTGGATTTAGGACCACCTCAAGGTGTGAGGGGTTGCACTCTGAGTTAGCAAAGTTTGTAAACTCAAGGTACAATCTGAGTGATTTTCTACAGCATTTTCATCGTTGCTTAAGTCACATGCGTTTTAAAGAGAAGGAAGATGAGTTTTCATCTCTTCACGGTGAACCGGCTGTTAGGTGTACTATTTTCACTGTTAGGGGTCAAAGTGTTGGTTCTTCGGAATGTCGTGTTTGTTTGTACCCTTGTACGAAAGAAATGAAATGTGCATGCATGAAAATGGAGTGTAGAGGGATACCTTGTGAGCATATCGTTTCTGTTTTGGCTCATTTAGGAATTGATGACATTCCTGACACATTGATCCTTAATAGGTGGTCAAAATATGTCAAGGCCGGTTTGGACAATGTAGTATGTCAGAATGTTGAATGTTTTGATGCAGCTTGGAGTGCTCGTAGGGCCTCTCTTAATGGTTTATACGACCATGTTAGTTGTTTCAAGGCTGGAACTATAGAAAAATATAATGCAGAGCGTGAGAGGATACTTGCAGACCTTACTCAATGCAGGGCAGAGGAAGGAGATGAACAGGGTCCATTTGGTTCCTCTTGTAATGGTGGTGCTGACACACTGAGGAACCCTGTTCGTGTAGGGACAAAGGGCAGTGGAGTCACATGTTCTTCTTCTGGTTTAAGAGTTCATAAAAAACAAAATTGTTCAATTTGCAAACTCCCGGGTCACAACAAATTGACCTGTCCGTCGCGTCCTGTTCATATGACGCAAGAAGATGTAGGTGCTGGTCCCTCTAACGGTGTCCATCAAAGTGAGGCACATGATCATTACGAAGATTTTGATCCAGAACAGGTTACCTAA 2283 0.4047 MNVCFENSEGGVVFENVDDDGGGDSGFAQESAREQESVCAQDSGGPFFFYDENWGTFIVGEDWEDNEVEDNVEEDDGDKIVIATDDDFLKMWNLGFFSPHEIEKYEFTNMEVAYNFYFEYGKANGFGIRRGRTLRNKRTLEEYQKEFMCCRAGVREDRGLRMEDRVREPRPETRCECEARFVVHVNKFSVRWYCICFVDKHNHDLLGVVHCSMLPVYRKISKCDVLQMNNIIKVGIRPPIIFSSFANQSGGYEKIGFRKKDMYNKINEQRRKNCSDAKSALQYLGELRLSDDKMYFEHTVDAEGRLQHLFWSDGMSQVDYKLFGEVLAFDATYGVNNHNHSTIFAAAIIANETEETYVWLLEQFSKAMKGKLSNAVITDGDLAMKNAIERVFPNAYHRLCAWHLMRNTTSNVKNADFTKSFEKCMLGYYDVGTFRKKRCELVATFGVEENPWVISIYEKRTIWATAYLRGKFFGGFRTTSRCEGLHSELAKFVNSRYNLSDFLQHFHRCLSHMRFKEKEDEFSSLHGEPAVRCTIFTVRGQSVGSSECRVCLYPCTKEMKCACMKMECRGIPCEHIVSVLAHLGIDDIPDTLILNRWSKYVKAGLDNVVCQNVECFDAAWSARRASLNGLYDHVSCFKAGTIEKYNAERERILADLTQCRAEEGDEQGPFGSSCNGGADTLRNPVRVGTKGSGVTCSSSGLRVHKKQNCSICKLPGHNKLTCPSRPVHMTQEDVGAGPSNGVHQSEAHDHYEDFDPEQVT 760
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi1153g00001 760 Pfam FAR1 DNA-binding domain 115 206 IPR004330 -
Sebi1153g00001 760 Coils Coil 642 662 - -
Sebi1153g00001 760 ProSiteProfiles Zinc finger SWIM-type profile. 553 584 IPR007527 GO:0008270
Sebi1153g00001 760 MobiDBLite consensus disorder prediction 723 760 - -
Sebi1153g00001 760 MobiDBLite consensus disorder prediction 745 760 - -
Sebi1153g00001 760 SMART 26again6 559 586 IPR006564 GO:0008270
Sebi1153g00001 760 Pfam MULE transposase domain 333 407 IPR018289 -
Sebi1153g00001 760 PANTHER OS01G0519700 PROTEIN 556 610 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi1153g00001 Sebi-Chr1153 18628 21149 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Sebi1153g00001 FAR1 3.2e-17 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi1153g00001 - - tpra:123913749 631.713