Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi1151g00001 CCCCGAGAGGAGTGTGGCGTTGTCGGCATCTACGGTGACCCTGAGGCTTCTCGTCTCTGTTACTTGGCCCTTCACGCGCTCCAACACCGTGGCCAAGAAGGTGCTGGAATCGTCACCGTTCACAACAACGTGCTTCAATCCATAACCGGTGTGGGACTTGTTTCTGATGTTTTCAATGAATCCAAGCTTGACCAGTTACCTGGGAGTTTGGCTATTGGCCATGTTCGCTACTCCACCGCTGGTCAATCCATGCTTAAAAATGTTCAGCCTTTTGTTGCTGGGTACCGTTTTGGCTCTGTTGGGGTTGCTCATAATGGCAATTTGGTGAACTATCGCACCTTAAGGGCTAAACTTGAAGAGAATGGATCCATTTTCAACACCACTTCTGATACTGAGGTTGTGCTCCATCTTATTGCTACTTCAAAGCATAGACCTTTCATATTGAGGATTGTTGATGCTTGTGAGAAGCTTGAAGGGGCTTATTCCATTGTGTTTGTCACTGAGGATAAGCTTGTTGCGGTTAGGGATCCTTTTGGATTTAGACCTTTGGTTATGGGGAGGAGAAGTAATGGTTCTGTTGTTTTTGCCTCTGAGACTTGTGCACTTGATTTGATTGAAGCTACTTATGAGAGAGAGGTTTATCCAGGTGAGGTTTTAGTGGTGGACAAGAATGGGGTTCAGTCCCTTTGTCTTATGTCTCATCCACAGCCAAAGCAATGTATCTTTGAGCATATATACTTTGCACTGCCAAATTCAGTTGTTTTTGGGAGGTCTGTGTATGAATCTCGCAGGCAATTTGGTGAGATATTGGCTACTGAGAGCCCTGTGGATTGTGATGTTGTGATAGCTGTTCCTGATTCTGGTGTTGTGGCTGCACTTGGTTATGCTGCCAAAGCTGGGGTTCCTTTTCAGCAGGGGCTGATAAGGTCTCACTATGTTGGGAGGACTTTCATTGAGCCATCTCAGAAGATTAGGGACTTTGGTGTGAAGTTGAAGCTCTCACCTGTGCGTGCTGTGCTTGAAGGTAAGAGGGTTGTGGTTGTGGATGACTCAATTGTGAGAGGAACCACATCTTCCAAAATAGTTAGGTTGCTCAAGGAGGCAGGTGCTAAGGAAGTTCACATGAGGATTGCAAGCCCACCAATTATTGGATCTTGTTATTATGGGGTGGATACACCAAGCTCTGAGGAGTTGATATCTAATAGGATGAGTGTGGAGGAAATAAGGGAGTTTATTGGATCAGATTCACTTGCTTTTCTTCCATTTGATAGCTTGAAGAAGCTTTTGGGGAATGACTCTCCAAATTTCTGCTATGCTTGTTTCTCAGGGAATTACCCTGTTGAGCCAAGAGAACTTAAAGTGAAGAGGGTTGGTGACTTTGTGGATGATGGCTTAAATGGGAGCTGGGAATCTATTGATGGGGGTTGGGTTCAAGCAAACAGAAATCAGAAGGAGGTGAAGGCTGCTACTAGTCTTTGA 1479 0.453 PREECGVVGIYGDPEASRLCYLALHALQHRGQEGAGIVTVHNNVLQSITGVGLVSDVFNESKLDQLPGSLAIGHVRYSTAGQSMLKNVQPFVAGYRFGSVGVAHNGNLVNYRTLRAKLEENGSIFNTTSDTEVVLHLIATSKHRPFILRIVDACEKLEGAYSIVFVTEDKLVAVRDPFGFRPLVMGRRSNGSVVFASETCALDLIEATYEREVYPGEVLVVDKNGVQSLCLMSHPQPKQCIFEHIYFALPNSVVFGRSVYESRRQFGEILATESPVDCDVVIAVPDSGVVAALGYAAKAGVPFQQGLIRSHYVGRTFIEPSQKIRDFGVKLKLSPVRAVLEGKRVVVVDDSIVRGTTSSKIVRLLKEAGAKEVHMRIASPPIIGSCYYGVDTPSSEELISNRMSVEEIREFIGSDSLAFLPFDSLKKLLGNDSPNFCYACFSGNYPVEPRELKVKRVGDFVDDGLNGSWESIDGGWVQANRNQKEVKAATSL 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi1151g00001 492 Hamap Amidophosphoribosyltransferase [purF]. 4 445 IPR005854 GO:0004044|GO:0009113
Sebi1151g00001 492 PIRSF Pur1 1 459 IPR005854 GO:0004044|GO:0009113
Sebi1151g00001 492 CDD GPATase_N 5 255 IPR035584 -
Sebi1151g00001 492 SUPERFAMILY N-terminal nucleophile aminohydrolases (Ntn hydrolases) 5 228 IPR029055 -
Sebi1151g00001 492 Pfam Phosphoribosyl transferase domain 279 374 IPR000836 -
Sebi1151g00001 492 Gene3D - 264 428 IPR029057 -
Sebi1151g00001 492 SUPERFAMILY PRTase-like 240 451 IPR029057 -
Sebi1151g00001 492 NCBIfam amidophosphoribosyltransferase 5 446 IPR005854 GO:0004044|GO:0009113
Sebi1151g00001 492 Pfam Glutamine amidotransferase domain 83 202 IPR017932 -
Sebi1151g00001 492 Gene3D Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 5 446 IPR029055 -
Sebi1151g00001 492 PANTHER AMIDOPHOSPHORIBOSYLTRANSFERASE 3 452 - -
Sebi1151g00001 492 ProSiteProfiles Glutamine amidotransferase type 2 domain profile. 5 224 IPR017932 -
Sebi1151g00001 492 CDD PRTases_typeI 267 378 IPR000836 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi1151g00001 Sebi-Chr1151 1911 3389 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi1151g00001 1 478 PRT Gene Family AT2G16570 87.292 0.0 858
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi1151g00001 K00764 - gmx:100791919 944.88