Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi1150g00001 ATGCCAGGGATGCAAGGATGGCAAGCGGCGGCGTTTCGCATATCAGGGGATAAAGCATACTTCTCCGGCTGTGGTTTCTACGGTGCACAAGACACTCTTTGCGACGACGCTGGCAGGCATTACTTCAAGGAATGCTATATCGAGGGTTCCATTGATTTCATTTTTGGGAATGGAAGATCCATGTACAAGGATTGCGTGCTACATTCAATAGCAACAAGGTTCGGATCCATAGCAGCCCACGATAGGAAACAACCAAAGGAGAAGACAGGGTTTGCATTCGTACGATGCAGGGTGACAGGTACAGGGCCGGTGTATGTGGGGAGAGCAATGGGGCAGTACTCAAGAATTGTCTATGCCTACACATATTTCGATGACATTGTTGCACACGGCGGTTGGGATGATTGGGACCATGCCAATAACAAGAACAAGACTGTGTTCTTCGGAGTGTACAAGTGTTGGGGACCAGGAGCAGAGGCAGTGCGTGGGGTCTCATGGGCACGAGAGTTAGATTTCGAGTCAGCACATCCATTTCTAGTAAAGAGCTTCGTCAATGGGAGACACTGGATAGCACCCTCTGATGCTTAG 585 0.4957 MPGMQGWQAAAFRISGDKAYFSGCGFYGAQDTLCDDAGRHYFKECYIEGSIDFIFGNGRSMYKDCVLHSIATRFGSIAAHDRKQPKEKTGFAFVRCRVTGTGPVYVGRAMGQYSRIVYAYTYFDDIVAHGGWDDWDHANNKNKTVFFGVYKCWGPGAEAVRGVSWARELDFESAHPFLVKSFVNGRHWIAPSDA 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi1150g00001 194 Gene3D - 2 193 IPR012334 -
Sebi1150g00001 194 ProSitePatterns Pectinesterase signature 2. 47 56 IPR033131 -
Sebi1150g00001 194 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 5 190 - -
Sebi1150g00001 194 SUPERFAMILY Pectin lyase-like 3 191 IPR011050 -
Sebi1150g00001 194 Pfam Pectinesterase 3 185 IPR000070 GO:0030599|GO:0042545
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi1150g00001 Sebi-Chr1150 5019 6606 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi1150g00001 1 194 Carbohydrate Esterase AT5G47500 86.598 1.27e-127 362
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi1150g00001 - - cam:101501763 407.912