Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi114g00019 ATGGTGGACACTGTAATGGGGTACCTCACACTTCCTCGCATTGGGCTTCCTATAGTTATCATTCAGTTCGCAAGGATAAACATCTATAAGGGAGAAGTTGGAATCCAGAATCTGATGAATGCTTCCAAGGTTCTATGGAACCCAGAGATACCAGAGGCCATAGAGTTCAAAAATAGGCCTGCTTCCATTAAGGATGAGTTTCTCAAACTGTACCCTAGGAAGTCTTTGTATGAGCTACTGCAGACAAATGAGGATGGATGCTTCATCATTCTAGGAACTGTTGACGAAGTTATGCAAGAATCTTTGTGGTGGTACATGGCGTGCAAGTGCATGAAGGCGGTTTCCTACGATGACGGGGTACCTTACTGCGAGGATTGTGATCTTTATGTTCCAGACTGTACTCCAAGGTACAAGTTAAAGCTTGCTGTCTCCGACGGATCTGATAGCGTTAGTTTGATCCTTTTCGACTCCGAGAGCTACTCATTGTTGGGCAAGTCGTGTCGTGAACTGTTATCGGAGAAGAGGTACACTCGGACATGTCCTTACCCTGCTGCTCTAATGGACTTAGTTGGACATGAGTTCCTATTTCGCGTTGAGGTCAAAGATGATGCTGTGTACTCATTTGATGAGTGCTTCAGGGTGCGACGAGTTTCATCTGAACCCACACTGATTCGAGAGTACACTGAAGGATTAGAGGAGGAAACTCCACTTAAGGGTCAAGCACTGGCATGCATGTGTCTGCTATTCAATGCTTCTGTCACTGAAATAGATGTTAGCCCATTATCAAATGATCCCTCGCCATCTGTTGGTGAAGACAGTGGGAGTGCATCGAAGAGGGAACCTGGGCATGCAACGGAATGTGCCACTGAGAAGAAGAAACGGGGCAGGGGGAAGTCCATCAAACTGGAAAGAACTTGA 918 0.4619 MVDTVMGYLTLPRIGLPIVIIQFARINIYKGEVGIQNLMNASKVLWNPEIPEAIEFKNRPASIKDEFLKLYPRKSLYELLQTNEDGCFIILGTVDEVMQESLWWYMACKCMKAVSYDDGVPYCEDCDLYVPDCTPRYKLKLAVSDGSDSVSLILFDSESYSLLGKSCRELLSEKRYTRTCPYPAALMDLVGHEFLFRVEVKDDAVYSFDECFRVRRVSSEPTLIREYTEGLEEETPLKGQALACMCLLFNASVTEIDVSPLSNDPSPSVGEDSGSASKREPGHATECATEKKKRGRGKSIKLERT 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi114g00019 305 Gene3D - 67 232 IPR012340 -
Sebi114g00019 305 MobiDBLite consensus disorder prediction 260 305 - -
Sebi114g00019 305 Pfam Replication factor-A C terminal domain 88 204 IPR013955 -
Sebi114g00019 305 SUPERFAMILY Nucleic acid-binding proteins 71 213 IPR012340 -
Sebi114g00019 305 Gene3D - 10 66 IPR012340 -
Sebi114g00019 305 CDD RPA1_DBD_C 88 203 IPR047192 -
Sebi114g00019 305 MobiDBLite consensus disorder prediction 276 293 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi114g00019 Sebi-Chr114 462786 464416 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi114g00019 17 203 Core DNA Replication Machinery Family AT5G61000 24.766 3.32e-07 49.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi114g00019 - - lja:Lj1g3v3385890.1 189.889