Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi114g00015 ATGAAGTTCAACATTGCGAATCCCACCACTGGATGCCAGAAGAAGCTAGAGATCGACGACGATCAGAAACTACGAGCATTTTGGGACAAGAGGATCTCACAGGAGGTCAGTGGAGATGCACTTGGTGAGGAATTTAAAGGCTATGTCTTCAAAATCACTGGAGGTTGTGACAAACAAGGATTCCCAATGAAGCAGGGAGTGCTGACCCCTGGTCGTGTGCGCCTCTTGCTTCACAGGGGAACGCCTTGTTTTCGTGGATATGGAAGGCGTAATGGAGAGCGCAGGAGGAAGTCTGTTCGTGGGCCTGACGACATTGAGAAGCCAAGGATGAGAGGTCCAAAGAGAGCATCCAAAATCCGTAAGCTGTTCAACTTGTCAAAGGAGGATGATGTGAGGAAGTATGTCAACACATACCGTCGACATTCACAACAAAATCTGGCATACTTTCTGATGAACTATGGCCTGTATAGTAATGGACATTTGGTTGCAGGGAAAAAGGTAAGCAAAGCTCCGAAAATACAACGACTTGTCACTCCTCTTACACTCCAAAGAAAGCGGGCAAGGATTGCTGATAAGAAGAAGAGAATCGCTAAGGCAAAATCAGAAGCAGCTGAGTACCAGAAGCTCCTTGCCTCCAGGTTGAAGGAGCAGAGGGAGCGTCGTAGTGAGAGTTTGGCTAAGAGGAGATCCAAGATCTCTAGTGTTACTAAGGCAGCTGCCACTCTATAA 729 0.4733 MKFNIANPTTGCQKKLEIDDDQKLRAFWDKRISQEVSGDALGEEFKGYVFKITGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGPDDIEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRHSQQNLAYFLMNYGLYSNGHLVAGKKVSKAPKIQRLVTPLTLQRKRARIADKKKRIAKAKSEAAEYQKLLASRLKEQRERRSESLAKRRSKISSVTKAAATL 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi114g00015 242 Pfam Ribosomal protein S6e 1 101 IPR001377 GO:0003735|GO:0005840|GO:0006412
Sebi114g00015 242 Gene3D - 109 227 - -
Sebi114g00015 242 PIRSF RPS6e 1 103 IPR014401 GO:0003735|GO:0005840|GO:0006412
Sebi114g00015 242 PIRSF RPS6e 101 241 IPR014401 GO:0003735|GO:0005840|GO:0006412
Sebi114g00015 242 MobiDBLite consensus disorder prediction 86 113 - -
Sebi114g00015 242 Coils Coil 182 209 - -
Sebi114g00015 242 MobiDBLite consensus disorder prediction 96 112 - -
Sebi114g00015 242 ProSitePatterns Ribosomal protein S6e signature. 52 63 IPR018282 GO:0003735|GO:0005840|GO:0006412
Sebi114g00015 242 SMART Ribosomal_S6e_2 1 110 IPR001377 GO:0003735|GO:0005840|GO:0006412
Sebi114g00015 242 MobiDBLite consensus disorder prediction 218 242 - -
Sebi114g00015 242 PANTHER 40S RIBOSOMAL PROTEIN S6 1 101 IPR001377 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi114g00015 Sebi-Chr114 453412 456471 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi114g00015 1 234 Cytoplasmic Ribosomal Protein Gene Family AT5G10360 70.085 1.84e-106 304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi114g00015 K02991 - gmx:100804076 352.058