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Gene search
Sequence information
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Gene
Cds
Cds_length
GC_content
Pep
Pep_length
Sebi114g00013
ATGGGGCGTGGGAATAGCAAAAAGAGGGCGGGAATAGCAAAGGTCTTGACATTGAGAAGGCAGAGCACAGAGCTCATTTTAGGCCCAAGAGTCACACCTAGTGAGAGTTCGTCGCGGCGGTTGCAAGAAGAAGATTCCAAGATGAAGTTCAACATTGCGAATCCCACCACTGGATGCCAGAAGAAGCTAGAGATCGACGACGATCAGAAACTACGAGCATTTTGGGACAAGAGGATCTCACAGGAGGTCAGTGGTGATGCACTTGGTGAGGAATTTAAAGGCTATGTCTTCAAAATCACTGGAGGTTGTGACAAACAAGGATTCCCAATGAAGCAGGGAGTGCTGACCCCTGGCCGTGTGCGCCTCTTGCTTCACAGGGGAACTCCTTGTTTTCGTGGATATGGAAGGCGTAATGGAGAGCGCAGGAGGAAGTCTGTTCGTGGGTGCATTGTCAGCCCAGACCTCTCTGTTCTAAACTTGGTAATTGTGAAGAAGGGTGACAATGATTTACCAGGCCTGACTGACATTGAGAAGCCAAGGATGAGAGGTCCAAAGAGAGCATCCAAAATCCGTAAGCTGTTCAACTTGTCAAAGGAGGATGATGTGAGGAAAGGCGTACAGCAGAGACAGAGCAGAGACGCACATGTAAGTAGAGGCAGCCCTAAACAAGTAACGAAGAGGGATGGAGAGGGAGATCGAAACAGAGGGAGAGTCCGAGATGTGATGTTCGACTTCAATAGCAGATGGCAGAAATGGCTGCACATTAGGTCATTTGCGTTTGCAGAAACGGGGAAAAAGGTAAGCAAAGCTCCGAAAATACAACGACTTGTCACTCCTCTTACACTCCAAAGAAAGCGGGCAAGGATTGCTGATAAGAAGAAGAGAATCGCTAAGGCAAAATCAGAAGCAGCTGAGTACCAGAAGCTCCTTGCCTCCAGGTTGAAGGAGCAGAGGGAGCGTCGTAGTGAGAGTTTGGCTAAGAGGAGATCCAAGATCTCTAGTGTTACTAAGGCAGCTGCCACTCTATAA
1029
0.4859
MGRGNSKKRAGIAKVLTLRRQSTELILGPRVTPSESSSRRLQEEDSKMKFNIANPTTGCQKKLEIDDDQKLRAFWDKRISQEVSGDALGEEFKGYVFKITGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSPDLSVLNLVIVKKGDNDLPGLTDIEKPRMRGPKRASKIRKLFNLSKEDDVRKGVQQRQSRDAHVSRGSPKQVTKRDGEGDRNRGRVRDVMFDFNSRWQKWLHIRSFAFAETGKKVSKAPKIQRLVTPLTLQRKRARIADKKKRIAKAKSEAAEYQKLLASRLKEQRERRSESLAKRRSKISSVTKAAATL
342
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Annotation information
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Seq ID
Length
Analysis
Description
Start
End
IPR
GO
Sebi114g00013
342
ProSitePatterns
Ribosomal protein S6e signature.
99
110
IPR018282
GO:0003735|GO:0005840|GO:0006412
Sebi114g00013
342
PANTHER
40S RIBOSOMAL PROTEIN S6
256
332
IPR001377
GO:0003735|GO:0005840|GO:0006412
Sebi114g00013
342
MobiDBLite
consensus disorder prediction
317
342
-
-
Sebi114g00013
342
Pfam
Ribosomal protein S6e
48
175
IPR001377
GO:0003735|GO:0005840|GO:0006412
Sebi114g00013
342
Gene3D
-
249
334
-
-
Sebi114g00013
342
MobiDBLite
consensus disorder prediction
201
235
-
-
Sebi114g00013
342
Hamap
30S ribosomal protein S6e [rps6e].
6
164
IPR020924
GO:0003735|GO:0005840|GO:0006412
Sebi114g00013
342
Gene3D
-
180
228
-
-
Sebi114g00013
342
Coils
Coil
282
309
-
-
Sebi114g00013
342
SMART
Ribosomal_S6e_2
48
175
IPR001377
GO:0003735|GO:0005840|GO:0006412
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Duplication type information
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Gene
Chromosome
Start
End
Duplicated_type
Sebi114g00013
Sebi-Chr114
363711
367848
Proximal
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Functional genes information
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Gene
Gene_start
Gene_end
Function
Ath_gene
Identity(%)
E-value
Score
Sebi114g00013
110
335
Cytoplasmic Ribosomal Protein Gene Family
AT4G31700
68.142
1.63e-87
259
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Pathway information
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Query
KO
Definition
Second KO
KEGG Genes ID
GHOSTX Score
Sebi114g00013
K02991
-
gmx:100801194
389.423
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