Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi1148g00002 ATGGTGGCAAGATCATACATCAATTTGTTGGACTTGGTGTCAGGGGATATTTTAAATTTCCCTCAAATGACTGTTCCAGGAGTTATGTCTGATTTAGATGGTAAACAAAGTAATGATGATGATTCAAATACTGTCTCATCAGATTCAGAACAGCGCCGCAAGATGATTATAGTAGCAAATTTTCTTCCTCTCAATGCTAAAAAGGATGACATATCTGGCAGATGGTGCTTTAGTTATGATGAAGATTCAATTTTTTGGCAGTTAAAGGATGGTCTCTCTGCTGATACAGATGTTGTTTATGTGGGATCTCTGAAGGTTGATGTTGATGCAAGTGAGCAAGAGAAAGTTTCTGTTCAGTTGCTGGAGGAATTCAATTGCTTGCCTACTTTTATTCCTTCAGACATCCAGGAACTGTTCTATAATGGATTCTGCAAGCAATATTTGTGGCCTCTATTCCATTACATGCTGCCCATGTATCCAGGCTATTGCAATCGCTTTGATAGGTCACTATGGCAGGCTTATGTGTCTGCTAACAAGATATTTGCAGATAGAGTCATGGAGGTCATTAATCCAGAAGATGATTTTGTATGGGTGCACGATTATCATCTCATGGTTCTTCCAACATTTCTGCGGAAGAGGTATAGTCGTGTCAAACTAGGCTTTTTCCTCCACACTCCATTTCCTTCATCGGAAATTTATCGAACTCTACCTGTCAGAGGTGAAATTTTGAAAGCACTGCTTAATGTAGATTTAATTGGCTTTCAGACATTTGATTATGCGCGCCATTTTTTGTCCTGCTGCAGTCGAATGCTTGGATTGAAATATGAATCCAAGAGGGGTTACATTGGGCTCGAATACTTTGGCCGTACAATATTCATTAAAATATTGCCTGCTGGGATTCATATGGGCCGCATTCAATCGGCCTTAAATCACCCTTGTACTTCTCTCAAAGTTAGAGAAATCTATGATCAGTATGAGGGGAAAAAACTTATCATTGGTGTTGATGATATGGACATATTCAAAGGTGTAAGTTTAAAGTTGTTAGCTATAGAACAACTCCTGCAGCAACTTCCACAACTACAGGGTGAATTGGTGCTGGTCCAAATTTTAAATCCCCCAATGAGTACCGGCAAAGAAGTCGAGGAGGCCTACATTATTGCTAAAAGGATAAACGAAAGGTTTGGTTTTCCAGGTTATGAACCTGTGGTCATCATTGATAGTCATGTTTCTTTCTATGAGAAGACAGCATATTATGCTTTGGCAGAATGTTGCATTGTGAATGCAGTGCGGGATGGTATGAACTTGGTTCCATACAAATATATTGTCTGTAGACAGGGGAGTTCTAATATTGATGAAGCCTTAGATATTGCTTCTGATTCCCTTCGTACAAGTGCGCTTGTTGTTTCTGAGTTCATAGGTTGTTCACCATCTCTTAGTGGGGCAATCAGGGTAAACCCATGGGATATTACTGCTGTAGCTGAAGCACTAAAGTTGGCTATCTCAATGCGCAATAGAGAGAAACAGTTCCGGCATGAGAAGCACTACCGATATGTTAGTTCTCATGATGTGGCTTACTGGGCCCAACGTTTTGAACAAGATCTTGAGTTCTCATGCAGGGATCACTATAGGAAACGTTGCTGGGGCATTGGCTTTGGCCTGAATTTTAGAATTTTGTCCCTCTCTCCTAATTTCAGGAAGCTATCCATAGACCACATTGCCTCTGCTTATAAAAGGACAACTTCCAGAGCAATCTTTTTGGATTATGATGGTACAATTGTACCTCAAACTTCCATTGTTAAATCCCCCACTCCTGAAGTCATATCCGTGCTAAATAATCTCTGCAGTGATCTTAACAACACTGTGTTTATTGTTAGCGGCAGGGGGAAAACTTCATTGAGTGAATGGTTTGATCAGTGTGAGAATCTTGGTATAGCAGCTGAGCATGGTTATTTCACAAGGTTCTATGAACTGATGGTATTTTTGTTTGATCTTTGCCATAGGTGGGGGAAACAATCAAGTTGGAAAATGAGTCATATAAGCACAAACTTTGCATGGAAAAGCATTGCGGAACCAGTCATGAGATCATATACTGAGGCGACAGATGGCTCCTATATAGAGACCAAAGAAAGTGCCTTGGTATGGCATTATTACAATGCCGACCCTGATTTTGGATCTTGGCAAGCCATGGAGCTGTTGGATCATCTTGAAAATGTACTTGCAAATGAGCCTGTAGTTGTTAAAAAGGGACAGCACATTGTTGAAGTCATGCTTCAGGGGGTTACTAAAGGGTCAGTTGCACAGGAAGTTCTGTCTACACTAACCAGTAATGGCAAATCGCCATATTTTGTGCTGTGCATTGGGGATGATAGATCTGATGAGGATATGTTTGAGAGCATATTAACCAAACCTTATAGTGCAACTTCCTCTTCAGCACCGGAAATCTTTGCATGTACTGTTGGACAGAAACCAAGCAAAGCTAGATACTACCTGGATGATACTGTGGATGTGATGATGTTACTTGAGGGTCTGGTTACCGCATCAGGGTCTAAATCAAAAGGTTCTACAGATGCCCCTTCTGAAAAAACAGAATTCTATTTTGAAAATTTGCTTGAAATGTAG 2619 0.4047 MVARSYINLLDLVSGDILNFPQMTVPGVMSDLDGKQSNDDDSNTVSSDSEQRRKMIIVANFLPLNAKKDDISGRWCFSYDEDSIFWQLKDGLSADTDVVYVGSLKVDVDASEQEKVSVQLLEEFNCLPTFIPSDIQELFYNGFCKQYLWPLFHYMLPMYPGYCNRFDRSLWQAYVSANKIFADRVMEVINPEDDFVWVHDYHLMVLPTFLRKRYSRVKLGFFLHTPFPSSEIYRTLPVRGEILKALLNVDLIGFQTFDYARHFLSCCSRMLGLKYESKRGYIGLEYFGRTIFIKILPAGIHMGRIQSALNHPCTSLKVREIYDQYEGKKLIIGVDDMDIFKGVSLKLLAIEQLLQQLPQLQGELVLVQILNPPMSTGKEVEEAYIIAKRINERFGFPGYEPVVIIDSHVSFYEKTAYYALAECCIVNAVRDGMNLVPYKYIVCRQGSSNIDEALDIASDSLRTSALVVSEFIGCSPSLSGAIRVNPWDITAVAEALKLAISMRNREKQFRHEKHYRYVSSHDVAYWAQRFEQDLEFSCRDHYRKRCWGIGFGLNFRILSLSPNFRKLSIDHIASAYKRTTSRAIFLDYDGTIVPQTSIVKSPTPEVISVLNNLCSDLNNTVFIVSGRGKTSLSEWFDQCENLGIAAEHGYFTRFYELMVFLFDLCHRWGKQSSWKMSHISTNFAWKSIAEPVMRSYTEATDGSYIETKESALVWHYYNADPDFGSWQAMELLDHLENVLANEPVVVKKGQHIVEVMLQGVTKGSVAQEVLSTLTSNGKSPYFVLCIGDDRSDEDMFESILTKPYSATSSSAPEIFACTVGQKPSKARYYLDDTVDVMMLLEGLVTASGSKSKGSTDAPSEKTEFYFENLLEM 872
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi1148g00002 872 MobiDBLite consensus disorder prediction 29 50 - -
Sebi1148g00002 872 Pfam Glycosyltransferase family 20 54 535 IPR001830 GO:0003824|GO:0005992
Sebi1148g00002 872 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 581 712 - -
Sebi1148g00002 872 FunFam Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 725 856 - -
Sebi1148g00002 872 SUPERFAMILY HAD-like 582 844 IPR036412 -
Sebi1148g00002 872 FunFam Alpha,alpha-trehalose-phosphate synthase 308 519 - -
Sebi1148g00002 872 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 54 535 - -
Sebi1148g00002 872 CDD HAD_TPP 583 838 - -
Sebi1148g00002 872 CDD GT20_TPS 54 535 IPR001830 GO:0003824|GO:0005992
Sebi1148g00002 872 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 47 306 - -
Sebi1148g00002 872 FunFam Trehalose-6-phosphate synthase 2 679 758 - -
Sebi1148g00002 872 NCBIfam trehalose-phosphatase 582 844 IPR003337 GO:0003824|GO:0005992
Sebi1148g00002 872 Pfam Trehalose-phosphatase 585 832 IPR003337 GO:0003824|GO:0005992
Sebi1148g00002 872 Gene3D Glycogen Phosphorylase B; 45 306 - -
Sebi1148g00002 872 Gene3D - 581 679 IPR023214 -
Sebi1148g00002 872 Gene3D - 725 857 IPR023214 -
Sebi1148g00002 872 NCBIfam HAD-IIB family hydrolase 583 798 IPR006379 -
Sebi1148g00002 872 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 23 844 IPR001830 GO:0003824|GO:0005992
Sebi1148g00002 872 Gene3D Glycogen Phosphorylase B; 307 519 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi1148g00002 Sebi-Chr1148 64477 67445 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi1148g00002 1 870 Trehalose Biosynthesis Gene Families AT1G23870 64.553 0.0 1196
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi1148g00002 K16055 - gmx:100812031 1377.84