Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi1147g00008 ATGAACAACTCGCAAGCTGTTCTTCATGATGATGGGAACCTTGTTCTTTCAGATAGAGACAATGGCAAAGAGGTGTGGCAGAGCTTTGAGGACCCAAGTGACACATTTCTGCCAGGTATGAAAGTGCCAGTGAGTGGTGGAATGAAGAAGAACGCTTCCTTCAGGTCATGGAAATCAGCAACGGATCCTTCACAAGGAAACTACACAATGAGGGTTGATTCTGAGGCAACACCACAGATAGTGATTTTGGAAGGAGAGAAAAGGAGGTGGAGAAGTGGGTATTGGGATGGTAGAGTATTCACAGGTGTGTCTAATATGACAGGAAGCTATCTATATGGTTTTAGACTTAATGCTGATGATAATGGAGGAAGGTACTTTGTATTTGATGCATTGGATAGCACTGACAAGATAAGGTTTCAGATAAGTTGGGATGGATATGAAAGGCAGTTCAGGTTGAATGAAGATAAAAAACAATGGAATATGATACAAAGTGAGCCTCATAATCAGTGTGAGCTTTATAATTTCTGTGGCAGTTTTGCAGTTTGTGATGTGTCTAATTCACCTTTATGTAGTTGCATACAAGGGTTTGAACCAAGACATTTGGATGAGTGGAATAGAGGGAATTGGTCAGTAGGGTGTAAGAGGATAACTCCACTTAAGGCTGAGAGAGGTAATAGTTCTGGGAATGTGGTTAGTGTTGGAGAAGATGGTTTCTTGGTGCAAAGGAATTTGAAGTTACCTGATTTTGCTAGTTTGGTCAATGCTGCTGATTCTGAGGACTGTGAGCGTAATTGCCACCAGAATAATTCTTGTACTGCATATGCATATGTTCTTGGAATTGGGTGCATGGTTTGGGACATGGAGTTAGTTGATGTTCAACACTTTGCAAATTTTGGAAATACACTCAACATTCGTCTTGCTGATTCTGATTTAGATGGGAAGGAGAACATCACTTCAAATGTCACACAAATTCTCACAAAAAGCTATGATGGTCAGGTTGTAATTACAGCATATGATTTCTATGTCTTCAAATACAGGTGGTGGGGAGAAAAAAACCAAAATTTGGATAATATTAGGTGTTGTGGTGGGGCTGATCTGCCTTGGAGTCATTGTATGGCTGGTATGGAGGTTCAAGAGAAAGCACAAAGCGATGTACAAGTCATTGGATTTGGACCAACCATAAGTACAGACTTATCAGCAGAAGTTTCACAATCAGCTGACCTTAGCTTGGAAGGGAATCAACTAAGTGGAGCAGAGCTTTCAATGTTCAGTTTTAGTTACATTTTAATGGCAACAAACAATTTCTCTGAAGAAAATAAGCTTGGACAAGGAGGGTTTGGTCCTGTTTATAAGGGAAAGCTTGTAGGGGGAGAAGAAATAGCTGTCAAGAGGCTTTCAAGACGGTCTAGCCAAGGATTAGAGGAGTTCAAGAATGAAATGATGCTAATAGCCAAATTACAACACAGAAACCTGGTTAGGCTATTGGGATGTTCAATTCAAGGGGAAGAAAAGTTACTGGTATATGAATACATGCCAAACAAAAGCTTGGACCGCTTTTTATTTGATCCAGTGAAGCAAACAAAATTAGACTGGACAAAACGTTGTGAAATCATTGAGGGCATTGCAAGAGGGCAATGTGGGACTATTTTCAATAACTCCAACAAGAACAAGGCTTGGCGTCTTTGGAGTGAAAAGAGAGAAATGGATTTTGTTGATTCTTCCATCCGTGATTCAAGTCCAAAGAGCAAAGCTTTGAGATGCATACACATAGGGATGTTATGCGTGCAAGATTCGGCAGCTCATAGACCAAACATGTCCTCTGTGGTGTTGATGCTGGAAAGTGAAGCAACAACTCTTCCCTTGCCTAAACAACCTTTGCTTACTTCCATTAGGAGATATGAAGAAACAGAATTTAATACCGAAGGCCTTGATATGTCAAATGACTTGTCGGTTACTATGGTGACAGGGAGATAG 1974 0.4053 MNNSQAVLHDDGNLVLSDRDNGKEVWQSFEDPSDTFLPGMKVPVSGGMKKNASFRSWKSATDPSQGNYTMRVDSEATPQIVILEGEKRRWRSGYWDGRVFTGVSNMTGSYLYGFRLNADDNGGRYFVFDALDSTDKIRFQISWDGYERQFRLNEDKKQWNMIQSEPHNQCELYNFCGSFAVCDVSNSPLCSCIQGFEPRHLDEWNRGNWSVGCKRITPLKAERGNSSGNVVSVGEDGFLVQRNLKLPDFASLVNAADSEDCERNCHQNNSCTAYAYVLGIGCMVWDMELVDVQHFANFGNTLNIRLADSDLDGKENITSNVTQILTKSYDGQVVITAYDFYVFKYRWWGEKNQNLDNIRCCGGADLPWSHCMAGMEVQEKAQSDVQVIGFGPTISTDLSAEVSQSADLSLEGNQLSGAELSMFSFSYILMATNNFSEENKLGQGGFGPVYKGKLVGGEEIAVKRLSRRSSQGLEEFKNEMMLIAKLQHRNLVRLLGCSIQGEEKLLVYEYMPNKSLDRFLFDPVKQTKLDWTKRCEIIEGIARGQCGTIFNNSNKNKAWRLWSEKREMDFVDSSIRDSSPKSKALRCIHIGMLCVQDSAAHRPNMSSVVLMLESEATTLPLPKQPLLTSIRRYEETEFNTEGLDMSNDLSVTMVTGR 657
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi1147g00008 657 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 5 603 - -
Sebi1147g00008 657 CDD PAN_AP_plant 235 307 - -
Sebi1147g00008 657 ProSiteProfiles Protein kinase domain profile. 435 657 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi1147g00008 657 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230 400 510 - -
Sebi1147g00008 657 Pfam D-mannose binding lectin 2 58 IPR001480 -
Sebi1147g00008 657 ProSiteProfiles PAN/Apple domain profile. 233 307 IPR003609 -
Sebi1147g00008 657 Pfam Protein tyrosine and serine/threonine kinase 438 544 IPR001245 GO:0004672|GO:0006468
Sebi1147g00008 657 SMART ntp_6 233 306 IPR003609 -
Sebi1147g00008 657 Pfam PAN-like domain 234 292 IPR003609 -
Sebi1147g00008 657 SUPERFAMILY Protein kinase-like (PK-like) 418 544 IPR011009 -
Sebi1147g00008 657 Gene3D Phosphorylase Kinase; domain 1 397 510 - -
Sebi1147g00008 657 Gene3D Transferase(Phosphotransferase) domain 1 545 620 - -
Sebi1147g00008 657 SUPERFAMILY alpha-D-mannose-specific plant lectins 3 97 IPR036426 -
Sebi1147g00008 657 Pfam S-locus glycoprotein domain 90 199 IPR000858 GO:0048544
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi1147g00008 Sebi-Chr1147 96655 102559 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi1147g00008 558 625 Receptor kinase-like Gene Family AT4G23230 51.471 8.02e-17 82.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Sebi1147g00008 PK_Tyr_Ser-Thr 1.2e-16 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi1147g00008 - - cam:101504189 702.205