Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi1147g00003 ATGCAGAGTGATAAGGGAAAGAATGCATGTGTCCAAAGTTTAGTAGTCAAAGCCGAAGTAGAAGTCTTCTTCTCATTTTGCTCTTGTTCTGATACCTTATTTGCTGACAAAGTCATAACAGATGGTGAGCTTCTTGTTTCTAAAGCTAAAACTTTTGCTCTTGGATTCTTCAGTCCAGGCAAATCCACCTCCCGTTATGTTGGAATTTGGTACAACAATTTGGCAGAACAAACTGTTGTTTGGGTTGCAAACAGAGATAGTCCCATCAATGACACCTCTGGAGTTCTCTCAATCAACCCAGATGGAAATCTAGTGCTTCACCACAACTATAGCACCTTTCCCATTTGGTCTACCAATGTTTCAGCCTCTCAATCAAACAGCACCAATGTTATAGCACAGCTCTCAGATATAGGAAACCTTGTTCTGATTCTAAACAACACCAAAAAAGTCATCTGGCAAAGCTTTGATCATCCCACAGACACCTTGCTTCCTTATCTAAAGATGGGTTTTGACAGAAGAACTAACCAGAGTTGGTTCCTCCAATCCTGGAAGACAGATGATGACCCAGGAATAGGTTCCTTCACATTGAAATTCAGTTCAGGTGGGAAACCTCAGATGTTTATGTACAACAAGAACCTTCCTTGGTGGAGAGGTGGACATTGGAATGGGGAACTATTTGTGGGTGTACCTAATATGAAACGAGATATGGCCACTTTTAATGTTTCTTTTGTGGAAGATGATGACTATGTAGCAGTCTCATATAACATGTTTGATAAGTCCATTATCCCCAGGATAGTAGTTCAGCAATCAGGTTTCTTTCAAATATTCACTTGGGATAACCAAAAAGGTCAATGGAACCGTTACTGGTCAGAACCAACAAATCAATGTGATAACTACGGAAGCTGTGGATCAAACAGTAACTGTGACCCTTTGAACTTTGAGGACTTTAAGTGTACTTGTTTACCAGGTTTTGAACCAAAATTCCCACGTGATTGGTATGAGAACAGAGATGGGTCAGGAGGGTGTGTGAGGAAGAAAGGTGCATCTGTTTGTGGGAATGGAGAAGGGTTTGTCAGAGTTGAAGGCTTGAAGGTACCTGATATATCTGTGGCAATTGTTAAAAGTGGTTTGAATTTGGAAGAATGTGAGAAGGAATGCTTGAGAAACTGCTCTTGTACTGCTTATTCAGTTGCTGATGTGAGGAATGGTGGAAGTGGGTGTTTGGCATGGCATGGGAATTTAATGGACACACAAAAACTAAGTGATCAAGGTCAAGATTTATTTGTACGTGTTGATGCAGTTGAACTAGCCAATTACTACAGAAAAAGTAAAGGAGTACTTGCTAAAAAGAGGATGGTTGCAGTTCTGGTAGCTTCTTTACTTGCAATTGTCATTCTCCTCTCCTATAAAATGATGCAGAAGTTAAACAAAGATTCTCCTAGAGAAGAGAACGATGTTCAAAGTAACACACATCCAAATCTTCCCTTTTTCAACTTTAAAACAATAATGGCAGCCACAAGAAATTTTAGTCATGAGAATAAGCTTGGTCAAGGTGGATTTGGCTCTGTCTATAAGGGCTGCCTAGTTAATGGACAAGAGATAGCAGTGAAAAGATTGTCCAAAGATTCAGGTCAAGGGACAGAAGAGTTTAAAAATGAAGTTACATTACTAGTTAAACTCCAACACAGAAATCTTGTGAGGTTGCTCGGTTGCTGCTTTGAAAAAGAAGAAAGGATGCTAGTTTATGAATACCTACCAAACAAAAGCTTGGACTTCTTTATATTTGGTATACCTTCCTCCATTTACTCATTCTATCCCCAGTCTGAAATAAATTTGCATTTAAATTACAAATATGAATATCCTAGTAACATGTTACATGAGACTGCTACATAG 1893 0.3914 MQSDKGKNACVQSLVVKAEVEVFFSFCSCSDTLFADKVITDGELLVSKAKTFALGFFSPGKSTSRYVGIWYNNLAEQTVVWVANRDSPINDTSGVLSINPDGNLVLHHNYSTFPIWSTNVSASQSNSTNVIAQLSDIGNLVLILNNTKKVIWQSFDHPTDTLLPYLKMGFDRRTNQSWFLQSWKTDDDPGIGSFTLKFSSGGKPQMFMYNKNLPWWRGGHWNGELFVGVPNMKRDMATFNVSFVEDDDYVAVSYNMFDKSIIPRIVVQQSGFFQIFTWDNQKGQWNRYWSEPTNQCDNYGSCGSNSNCDPLNFEDFKCTCLPGFEPKFPRDWYENRDGSGGCVRKKGASVCGNGEGFVRVEGLKVPDISVAIVKSGLNLEECEKECLRNCSCTAYSVADVRNGGSGCLAWHGNLMDTQKLSDQGQDLFVRVDAVELANYYRKSKGVLAKKRMVAVLVASLLAIVILLSYKMMQKLNKDSPREENDVQSNTHPNLPFFNFKTIMAATRNFSHENKLGQGGFGSVYKGCLVNGQEIAVKRLSKDSGQGTEEFKNEVTLLVKLQHRNLVRLLGCCFEKEERMLVYEYLPNKSLDFFIFGIPSSIYSFYPQSEINLHLNYKYEYPSNMLHETAT 630
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi1147g00003 630 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 25 155 - -
Sebi1147g00003 630 ProSitePatterns Protein kinases ATP-binding region signature. 515 537 IPR017441 GO:0005524
Sebi1147g00003 630 ProSiteProfiles EGF-like domain profile. 292 330 IPR000742 -
Sebi1147g00003 630 SUPERFAMILY alpha-D-mannose-specific plant lectins 79 189 IPR036426 -
Sebi1147g00003 630 SMART ntp_6 352 431 IPR003609 -
Sebi1147g00003 630 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 473 584 - -
Sebi1147g00003 630 Pfam Protein tyrosine and serine/threonine kinase 511 594 IPR001245 GO:0004672|GO:0006468
Sebi1147g00003 630 Gene3D Hepatocyte Growth Factor 349 429 - -
Sebi1147g00003 630 CDD B_lectin 36 158 IPR001480 -
Sebi1147g00003 630 ProSiteProfiles Protein kinase domain profile. 509 630 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi1147g00003 630 Pfam PAN-like domain 351 417 IPR003609 -
Sebi1147g00003 630 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 22 594 - -
Sebi1147g00003 630 Pfam S-locus glycoprotein domain 216 328 IPR000858 GO:0048544
Sebi1147g00003 630 ProSiteProfiles PAN/Apple domain profile. 351 432 IPR003609 -
Sebi1147g00003 630 ProSiteProfiles Bulb-type lectin domain profile. 30 155 IPR001480 -
Sebi1147g00003 630 SUPERFAMILY Protein kinase-like (PK-like) 484 601 IPR011009 -
Sebi1147g00003 630 CDD PAN_AP_plant 352 431 - -
Sebi1147g00003 630 SMART blect_4 36 158 IPR001480 -
Sebi1147g00003 630 Gene3D - 26 156 IPR036426 -
Sebi1147g00003 630 Gene3D Phosphorylase Kinase; domain 1 468 584 - -
Sebi1147g00003 630 Pfam D-mannose binding lectin 78 184 IPR001480 -
Sebi1147g00003 630 SMART tyrkin_6 509 629 IPR020635 GO:0004713|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi1147g00003 Sebi-Chr1147 29432 32696 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi1147g00003 443 595 Receptor kinase-like Gene Family AT4G23190 51.266 1.20e-41 157
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Sebi1147g00003 S_locus_glycop 5.6e-28 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi1147g00003 - - mtr:11411809 957.592