Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi1147g00002 ATGGAAGGGAGATATTCAACAAAATCTGATGTCTTCAGTTATGGGGTCTTACTACTAGAGATTATTGCTGGCAAGAGGAACACAGATTGTGAAACAGGAAGAGCCTCCCCAAATTTAATTGGACATGTGTGGATGCTTTGGACAGAAGGAAGGGCCTTGGATATTGTTGATTCAACACTAGGCCAGTCTTATCCTCCTGCTCTAGTTCTGAGATGCATTCAAATTGGACTCTTATGCGTGCAAGAAAATGCTATCAATAGACCATCCATGTTAGAAGTTGTTTTCATGCTAGGCAATGAAGCACCTCTTTGTTCACCCCAAAAGCCAGCATTTTTATTCAATGTCAACCAAGATTTGCAAGAGTCATCAACTTCAGGAGGAGCATGTTCAATAAATGAAGTAACAACAACTACCATCAGTGCTCGCTAA 429 0.4079 MEGRYSTKSDVFSYGVLLLEIIAGKRNTDCETGRASPNLIGHVWMLWTEGRALDIVDSTLGQSYPPALVLRCIQIGLLCVQENAINRPSMLEVVFMLGNEAPLCSPQKPAFLFNVNQDLQESSTSGGACSINEVTTTTISAR 142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi1147g00002 142 Gene3D Transferase(Phosphotransferase) domain 1 1 105 - -
Sebi1147g00002 142 Pfam Protein tyrosine and serine/threonine kinase 2 94 IPR001245 GO:0004672|GO:0006468
Sebi1147g00002 142 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 1 141 - -
Sebi1147g00002 142 SUPERFAMILY Protein kinase-like (PK-like) 3 119 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi1147g00002 Sebi-Chr1147 27934 28439 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi1147g00002 3 115 Receptor kinase-like Gene Family AT4G23320 50.435 2.85e-31 114
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Sebi1147g00002 PK_Tyr_Ser-Thr 1.3e-05 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi1147g00002 - - tpra:123918163 246.899