Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi1141g00004 ATGGCAGAAGAGAGCTCTGATGACAGAAAAGGGAAGCGAGTAGTGGATGAAGGTGGCAACAATGATTGGAGTAGTTCTTCACCATCATCATTATCATCTGGAAACTGTGACACTGATGCTGAAGAACTACTAGTAGCAGATATTCTTCTAAAAATGGGAAACCTTATGCTAGAATCCCTTACCCAACTCCGCCAAGAGTTACAGCAAATGCCACCAGTGCCAAGCCTTGAAGGCATTGTGAAAGACGGCAAATTCAGCAAGCCATTTGAGAAGCAGTTAGAAGCGAACGATGCGTCGAACCTATTCCTTCCAAAACGTGAGATTGAAGATTGTTTCTTGGAGTTCTTGAAAGAAGAAGACGGTGGTGGGGTTCTTGCGGGAAACGGGGTTCAAGTGATGGTGTACGATAAGGATGGTAAAGGGCATAGCATGATGTTGAAGAGAAGGGATAACAGAGGTTACCGTATGCTGAATGGAAAAGGAGGAACTGGGTGGGGAAGTTTCTATGAGAGTCATGATTTGGTGTTTGCGGATTTCATTACGATTTGGGCGTTTCGCCATGCTGAAACCCACATGTTATGCTTTGTTGTAATTTCAGGAAAAGAGGATTGA 612 0.4412 MAEESSDDRKGKRVVDEGGNNDWSSSSPSSLSSGNCDTDAEELLVADILLKMGNLMLESLTQLRQELQQMPPVPSLEGIVKDGKFSKPFEKQLEANDASNLFLPKREIEDCFLEFLKEEDGGGVLAGNGVQVMVYDKDGKGHSMMLKRRDNRGYRMLNGKGGTGWGSFYESHDLVFADFITIWAFRHAETHMLCFVVISGKED 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi1141g00004 203 SUPERFAMILY DNA-binding pseudobarrel domain 89 196 IPR015300 -
Sebi1141g00004 203 MobiDBLite consensus disorder prediction 1 36 - -
Sebi1141g00004 203 CDD B3_DNA 89 197 IPR003340 GO:0003677
Sebi1141g00004 203 SMART B3_2 89 202 IPR003340 GO:0003677
Sebi1141g00004 203 MobiDBLite consensus disorder prediction 1 17 - -
Sebi1141g00004 203 MobiDBLite consensus disorder prediction 19 36 - -
Sebi1141g00004 203 PANTHER B3 DOMAIN PLANT PROTEIN-RELATED 84 197 IPR005508 GO:0003677
Sebi1141g00004 203 Gene3D - 79 198 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi1141g00004 Sebi-Chr1141 29363 30094 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi1141g00004 85 197 B3 DNA Binding Superfamily AT4G03170 32.787 8.11e-14 66.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi1141g00004 - - mesc:122723330 83.1889