Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi113g00001 ATGAGCGAAGAAGAGAAGAAGATGTGTCTTCTTACCGCAACGAACACAGGTTTTCTTCTTGACCCTGCAAAATGTGCTGCGCTGAATTTGCAAGACAAACAAAGACTAGTCCATGAGATTGCTCAGTCAAAAGATGCCCCAAATATGCTTCATTCATTTACTCGCAGGGAACTTCTAGAAATAATCTGTGCTGAATTAGGCAAAGAGAGGAAGTACACAGGATATACTAAGAGTCAAATGATAGAACATCTTCTGAAGATAATTTCTAAAAAATCCAATTCAGATGTCATCCAAAATACTTGTGCCCATTCTCCTGCCAAAAGTTGCATTGGATCTAAAAGGAAAAAAGGACCTCCATCTCTGGATTTACAATATGCTCCTCTAGAGAACAGTAAAGAGGAAACGGTGAAAATCTTGGTCTGTCAGAATGTTGCATGCAGAGCTACATTGAATCCTGAAGATTCTTTCTGCAAAAGATGTTCATGTTGTATATGTCATTGTTATGATGATAACAAGGATCCAAGTTTGTGGTTGACCTGCAGTTCTGATCATACCAATGAGGAGTCATGTGGAATGTCGTGCCATTTGCAATGTGCTTTGAGTAATCAAGTACTTGGCATTTTGAAGGGCCGTGGTGGTATAACCTTGGATGGAAGCTTCTATTGTGTTTCATGTGGAAAAATTAATGAATTAATGAGGACATGGCGAAAGCAATTATTGGTTGCCAAAGAAGCAAGAAGAGTGGATATACTATCATTACGAATATCCTTGGCCCACAGAATTCTTGTAGGAACAGAAGTCTACAAGGAAGTGCAGAAGATTGTTGAAACTGCTCTCAAATTACTGGAGAATGAAGTGGGACCTCTGGATCATGTATATGCTCGGATGACACGTGGAATTGTGAGCAGGCTCTCAAGTGGTGCTGAGGTTCAGAAGTTGTGCAATACTGCAGTTGAATGTTTTGATTCAAAGTTTTCTGACCTCTTCTCTAATTGTGCAGAAAAGAAAGATGCGCCAACATGCTCTATACGTTTTGAAGAGTATCTTCCTACCTCAGTGATCATTGTGCTAGAATACAATGATAAACTTTTAAAGAACTTTCTAGGCTGCAGGCTTTGGTACCGAATGTCAACAATGGACTACCCAGAACAACCCGCCTTCATTGTTTTAAGGCCTGAGAAAAGATTCAAGTTAGAAAACCTCCATCCTTCAACTGAATACTTTTGCAAGGCTTCTCTATTCAGCAGCACAGGGATTTTGGGTGCAGCTGAAGCTAAATGGGTGACACCTTGTGAACCCTTAAGTTCTCCTCCAAAAATCATTAGACATGGTGGGAATCATTCAAGAGGTACAGTCATGGTGGACATAAGTGCTCAAGACCAAATTAAGATAACTGCTGAAAATCATCAGGGTAGTCAAATGGTTAGAGAATCAAGGGCACATAGAAGAAATTTTCAGAGTGAAATTTCTCACTTGGTTCAGCCTCAAGGCTACTCAGCAGGAGAGAAGGGTGGTTAG 1518 0.4032 MSEEEKKMCLLTATNTGFLLDPAKCAALNLQDKQRLVHEIAQSKDAPNMLHSFTRRELLEIICAELGKERKYTGYTKSQMIEHLLKIISKKSNSDVIQNTCAHSPAKSCIGSKRKKGPPSLDLQYAPLENSKEETVKILVCQNVACRATLNPEDSFCKRCSCCICHCYDDNKDPSLWLTCSSDHTNEESCGMSCHLQCALSNQVLGILKGRGGITLDGSFYCVSCGKINELMRTWRKQLLVAKEARRVDILSLRISLAHRILVGTEVYKEVQKIVETALKLLENEVGPLDHVYARMTRGIVSRLSSGAEVQKLCNTAVECFDSKFSDLFSNCAEKKDAPTCSIRFEEYLPTSVIIVLEYNDKLLKNFLGCRLWYRMSTMDYPEQPAFIVLRPEKRFKLENLHPSTEYFCKASLFSSTGILGAAEAKWVTPCEPLSSPPKIIRHGGNHSRGTVMVDISAQDQIKITAENHQGSQMVRESRAHRRNFQSEISHLVQPQGYSAGEKGG 505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi113g00001 505 PANTHER VIN3-LIKE PROTEIN 2-RELATED 18 484 IPR044514 GO:0010048|GO:0040029
Sebi113g00001 505 Pfam PHD - plant homeodomain finger protein 141 260 IPR032881 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi113g00001 Sebi-Chr113 192366 197037 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi113g00001 20 429 PHD Gene Family AT5G57380 38.072 8.19e-85 271
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi113g00001 - - gmx:100785502 741.495