Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi1138g00004 ATGGGAACTGATGAGGAGTGCTCCATTGTTCTCGAGTTATCTGAAAATGATCCTTTCTTTGATAAAAAGAAGAAATTATTACAAAGTAAGGGGTTTAGTCCCAAGGAACGGATATGTCTCACGAGCTCCTCAGAACCTGGTTGGATGAATGCTAGTGCAAAGATTTTACTCCAGATTGCACGAATCATACAGTTAAATGAGCTGGAGCTTTATTTTGCTGAAGACGATGCATGCACATCAGTGGAGTTTTACAGTGCCAGGAATGAGCTGGAGGCTCTCAATTTAATTGTCCTGCTCATTGACACATCACTTTCTAGTTGCACACATCTCCATACAAATATCTTGCAAGGGTTACGACAAACAATTCTTGATTTAATTTCTGATTTTGGGGACAAAAATAGCATGAAGGGAGTAGTTGAAAAGAACCACAGCTGTGACAAAGAAGAATGCCTGATAGAGTGGGGTGAAAGCAATGGGGTAAAGACCCAGTTAAAGATAGCTTATGTTGAAGGAGCAGGTCGGGGTGCGATAGCAAGAAGAGATCTAAAAGTTGGAGACATTGCTTTAGAAATTCCTGTGTCCGTTATCATTTCTGAGGAGGTCGTGCATGAAACTGATATGTATCGTGTCTTAAAAGAGGTTGATGGCATATCATCTGAGACAATATTGCTATTATGGAGCATGAAAGAGAAGTATAACTGTGATTCAAAATTCAAAGTTTACTTTGACACACTTCCAGAAAAATTTAATACAGATGGAACCCTGCTGTTTGAAGAGATAATGCAAGCAAGACAGCACCTGCATGCTCAATATGATGAGTTGTTTCCGGCTTTGTGCAATGAGTTTCCTGATATATTTCCACGAGAGCTGTACACGTGGGAGAAATTTTTATGGGCTTGTGAACTTTGGTACTCCAATAGCATGACGATAATGTATTCTGATGGAAAGCTGAGAACATGCTTGATTCCTATTGCTGGCTTTCTTAATCATTCATTGTGCCCACATGTTATGCACTATGGCAAAGTAGATCCTTCAACAAATTCATTGAAATTTCGTCTGTCAAGACCATGCAGATCTGGAGAAGAATGCTGCTTAAGCTATGGGAACTACTCCAGCTCTCATCTAATTACCTTTTATGGTTTCTTACCTGAAGGAGACAACCCGTATGATGTCATTCCGTTAGACATTGATGGTTATGATGTTGATTCTATTGAGGATAAACCCGTGTCCAACTGGACGACTCACATGGTGCGTGGTACTTGGCTCTCCAACAATCACAGCACATTCTATTATGGCTTACCCGCTCCATTATTAGAGCATCTTCGGAGATCTCGAAGTCCCATGCTGCGAACTAAGACTTTCTTGCAAGGAAACTTGGAAAATGAGCTGGAAGTTCTTGAAGATCTTATATGTATCTTCGATGACATGATGGACAATATGGGTGACATCGATCTTGATAACAGTGAAAACTGCAATTGGGATGAAAGGTTGGCCATGAATTTTAAAAATCTACAAAGACGAATTGCCTGTTCTGTTTCAACTTCATGTCATGCTGGTGTCAACATGTTGAAGAATGAACTATACAAGTGCATGGCTGAGGACATCCGAGGCTAA 1614 0.4033 MGTDEECSIVLELSENDPFFDKKKKLLQSKGFSPKERICLTSSSEPGWMNASAKILLQIARIIQLNELELYFAEDDACTSVEFYSARNELEALNLIVLLIDTSLSSCTHLHTNILQGLRQTILDLISDFGDKNSMKGVVEKNHSCDKEECLIEWGESNGVKTQLKIAYVEGAGRGAIARRDLKVGDIALEIPVSVIISEEVVHETDMYRVLKEVDGISSETILLLWSMKEKYNCDSKFKVYFDTLPEKFNTDGTLLFEEIMQARQHLHAQYDELFPALCNEFPDIFPRELYTWEKFLWACELWYSNSMTIMYSDGKLRTCLIPIAGFLNHSLCPHVMHYGKVDPSTNSLKFRLSRPCRSGEECCLSYGNYSSSHLITFYGFLPEGDNPYDVIPLDIDGYDVDSIEDKPVSNWTTHMVRGTWLSNNHSTFYYGLPAPLLEHLRRSRSPMLRTKTFLQGNLENELEVLEDLICIFDDMMDNMGDIDLDNSENCNWDERLAMNFKNLQRRIACSVSTSCHAGVNMLKNELYKCMAEDIRG 537
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi1138g00004 537 Gene3D set domain protein methyltransferase, domain 1 145 382 - -
Sebi1138g00004 537 ProSiteProfiles SET domain profile. 162 368 IPR001214 GO:0005515
Sebi1138g00004 537 SUPERFAMILY SET domain 148 389 IPR046341 -
Sebi1138g00004 537 CDD SET_LSMT 164 382 - -
Sebi1138g00004 537 PANTHER UNCHARACTERIZED PUTATIVE METHYLTRANSFERASE 145 477 - -
Sebi1138g00004 537 FunFam Transcription factor, E2F and DP-related 146 382 - -
Sebi1138g00004 537 Pfam SET domain 173 368 IPR001214 GO:0005515
Sebi1138g00004 537 Gene3D - 3 114 IPR036464 -
Sebi1138g00004 537 Pfam Rubisco LSMT substrate-binding 15 106 IPR015353 -
Sebi1138g00004 537 FunFam SET domain-containing protein 4 142 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Sebi1138g00004 SET 1.9e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi1138g00004 K19199 - gmx:100778605 940.643