Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi1136g00004 ATGAATAGTGATGACATCCGATGTATGGAGTTTACTAGTGAAGAGGATGGTTATCTATTTTACCAATCATATGCAAAGTGTCATGGTTTTGTTGTTAGGAAAGATGAGGTGGATAGGAAAAAAAAGCATAGGGCAAAAACTCGTGTGAGTTGTGAAGCTAAGCTAAGAATTCGCTTAGATTATAAGACATCTAAATGGAAGGTGGTATCTTTTGTGGAGACTCATAATCATGAGCTTCCTCCTTACAGTTATGTTCATTTATTACCTGCTTATAGAGGCCTAACTGATGCAGATAAAGCTCAAGTAGATAGGTTGCACGCATATGGTGTAGCCATGTATTCTAATTTCACAGAGGATAAATTTGAAGTGCTTTGGAAGCGAATGGTTGCAAAACATGGTCTTATAAGAAACAAGTGGGTGACTAAAACCTATGAAAATAGGTTTGGGCAAGTTTTGAGAGAATATAGGAACAATGAGATGATTGCAGATTTCAAGTCTATGTTTACTCATCCAGTTCTAACTACCTCTCTTCAGAAAATTGAGAGTGATGCGGCCAAAATATTCACATTGGAGATTTTTAGGGAAGTGAAAACTGAGATTGAGCTTGCTGGTGCATTAAATGTAATTGCAAGGGTGGAAAACGGAGATAAGCTGATTTTTAAGATGAACCCTTACGGTAAACCTGGTCATGATATTCAGGTGGTGTATGATGTTGCCAATTCTCAATTTCTATGTGATTGTAGACTGTTTGAGAGTCGTGGAATCCCATGTTGTCATGTAATATGTGCATTGAAAAATGAAAACATGCAATCCATTCCAAGTAGCTTGATTTTGAATCGTTGGACAAAGAAGTGCAAGATTGATCTTATTTCGACATATCAATCAGAGGATGTGGATACTGATGTCATGAAAACTGCCCGTTTAGGGGCTGTTGATGGAGTTTTCCAAAGGTTGGGTTGTATTGTTGTAGAAAAGAGAGAATATTTCAATAATATAATGGAAGATTTGTTGAAGGTGACGAATAAATATGAGATGATAAGGGAAACACGTGCCACACAAACCAACCGTGAAAAGATTGTCAAAGATCCACCAGTTGTGAAAACAAAAGGAGCACCACCGAAAAAAAAGTACGGGAGAAAAAGGAGAAGATGCTCTAAGTGCAATAGACCCAGACATATTAGTAGTTGTCCTGAGCTTCTTGGTAAGGAACAAGAAGACCATAATATGCATGATTCAGGTTCAGAAGACAATGAGGATAATGGCACCACACCAGTAGATGAAGACAATGGTGGTGACAATGTGCTTAGTAACAGTAGTCAAAGATTTAATGATAATGAAGTAAATGTTAAGCTGAGTTGTAGTGATAAAGTGAAGGAAAAGGAACCGAAGAAACAACAAAACCATTCCATTGGCACAACTATTGGAGCTAAGAATGAATTTTATCCTGGCAACTATGTTTTGCACTCAATCCCCAACTATGCCTTTAGTCATGGGTCATCAACCCAACCAATTGGAATGCCACCCCAATATGGTGGTGTTCCTATGTATCCTCATGGTTACGTTCCTATTTACCCTAACATGGTTATGCAAAATCCACAAAATGCTCATGGTGGTGGTTCTTGGAATGACTTGCTTCAACAAGTCATGAATAACAGAATAGGATTAGGTGGCAAACCCAACAAGCATACGGAGTCTATGAATGGGGAACAATACATTTACCTTGCTTAG 1728 0.3814 MNSDDIRCMEFTSEEDGYLFYQSYAKCHGFVVRKDEVDRKKKHRAKTRVSCEAKLRIRLDYKTSKWKVVSFVETHNHELPPYSYVHLLPAYRGLTDADKAQVDRLHAYGVAMYSNFTEDKFEVLWKRMVAKHGLIRNKWVTKTYENRFGQVLREYRNNEMIADFKSMFTHPVLTTSLQKIESDAAKIFTLEIFREVKTEIELAGALNVIARVENGDKLIFKMNPYGKPGHDIQVVYDVANSQFLCDCRLFESRGIPCCHVICALKNENMQSIPSSLILNRWTKKCKIDLISTYQSEDVDTDVMKTARLGAVDGVFQRLGCIVVEKREYFNNIMEDLLKVTNKYEMIRETRATQTNREKIVKDPPVVKTKGAPPKKKYGRKRRRCSKCNRPRHISSCPELLGKEQEDHNMHDSGSEDNEDNGTTPVDEDNGGDNVLSNSSQRFNDNEVNVKLSCSDKVKEKEPKKQQNHSIGTTIGAKNEFYPGNYVLHSIPNYAFSHGSSTQPIGMPPQYGGVPMYPHGYVPIYPNMVMQNPQNAHGGGSWNDLLQQVMNNRIGLGGKPNKHTESMNGEQYIYLA 575
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi1136g00004 575 ProSiteProfiles Zinc finger SWIM-type profile. 230 268 IPR007527 GO:0008270
Sebi1136g00004 575 MobiDBLite consensus disorder prediction 372 389 - -
Sebi1136g00004 575 MobiDBLite consensus disorder prediction 426 448 - -
Sebi1136g00004 575 SMART 26again6 243 270 IPR006564 GO:0008270
Sebi1136g00004 575 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 111 310 IPR031052 GO:0006355
Sebi1136g00004 575 MobiDBLite consensus disorder prediction 396 417 - -
Sebi1136g00004 575 MobiDBLite consensus disorder prediction 354 448 - -
Sebi1136g00004 575 Pfam FAR1 DNA-binding domain 38 79 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi1136g00004 Sebi-Chr1136 52126 55439 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Sebi1136g00004 FAR1 6.3e-09 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi1136g00004 - - ccaj:109792835 291.197