Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi1130g00006 ATGCAGACTCGTGCTGCTGCAAAGAGGAAGGCCAACCTAGATGTCGAGAATCAACCCCTCCAAAAGAAAAGGGTTGTATTAGGGGAACTCCCTAATTCAACCAATGTTATTATTGGTAAACCCAAAACCCTGAATCTCAAATTGAAGAAAGCACCTGCAACCACAAAGACCAAGACTGATAAGGAATCCAACAAAGGCATTGATCCAGAGTCAACAACTCATGATAGTGTTTTTGTTATTGATATCTATGACTATCTCCGTGGAATGGAGATGCGAAGACCAATTTCTAATTACATGGACAGAGTCCAGAAAGATATTACTAGTTACATGAGAGGAATATTAGTAAATTGGTTAGTAGAGGTTGCAGAGGAGTACAAGCTTCTCTCTGATACCCTTCATCTCTCCGTTTCCTACATTGACAGGTTCCTATCCGTTAACCCTGTCATTAAATCCAGGCTTCAATTGCTGGGTGTTTCTTCCATGCTAATTGCATCAAAGTATGAAGAAATTAATCCACCCCGTGTGGAACAGTTCTGCAACATTACTGATAACACATATGACAAGGCAGACGTTGTGAAAATGGAAGCTGACATACTCAAGTCCCTAAAATTTGAACTGGGGAGCCCTACTGTTAAGACTTTCTTAAGGCAAGAGAGGTTTATTGGTATTGCTTGTGAGACTAAAAATGCTCCAAGTTTGCAGTTTGAGTTTCTGTGTTACTATCTTGCTGAACTAAGCTTGTTGGACTATCATTGTGTTAAGTTTTTGCCTTCTTTTGTGGCTGCAGCTGTAGTATTTCTTGCTAGATTTATTGTTTGGCCTGAAGTTAATCCTTGGGTAGGTACATCAGCACTCCTTGAGTGCACTGGGTATATATCACTTCAGCTGAGAGAATGTGTTTGCATCTTACATGATCTGTATATGGCAAGAAGGGGAGAATCTTTCCAAGCTACTCGGGAGAAATACAGTCAGCACAAGTTTAAACATGTGGCAAACCTGCCTTCGCCTCCACACTTACCAAGTGATCTCTTTGAATATTAA 1041 0.4054 MQTRAAAKRKANLDVENQPLQKKRVVLGELPNSTNVIIGKPKTLNLKLKKAPATTKTKTDKESNKGIDPESTTHDSVFVIDIYDYLRGMEMRRPISNYMDRVQKDITSYMRGILVNWLVEVAEEYKLLSDTLHLSVSYIDRFLSVNPVIKSRLQLLGVSSMLIASKYEEINPPRVEQFCNITDNTYDKADVVKMEADILKSLKFELGSPTVKTFLRQERFIGIACETKNAPSLQFEFLCYYLAELSLLDYHCVKFLPSFVAAAVVFLARFIVWPEVNPWVGTSALLECTGYISLQLRECVCILHDLYMARRGESFQATREKYSQHKFKHVANLPSPPHLPSDLFEY 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi1130g00006 346 MobiDBLite consensus disorder prediction 53 69 - -
Sebi1130g00006 346 MobiDBLite consensus disorder prediction 49 70 - -
Sebi1130g00006 346 Gene3D - 81 332 - -
Sebi1130g00006 346 Pfam Cyclin, C-terminal domain 209 335 IPR004367 -
Sebi1130g00006 346 ProSitePatterns Cyclins signature. 111 142 IPR006671 -
Sebi1130g00006 346 SUPERFAMILY Cyclin-like 209 338 IPR036915 -
Sebi1130g00006 346 Gene3D - 95 207 - -
Sebi1130g00006 346 SUPERFAMILY Cyclin-like 76 206 IPR036915 -
Sebi1130g00006 346 PIRSF Cyclin_A_B_D_E 2 344 IPR046965 GO:0016538|GO:0044772
Sebi1130g00006 346 FunFam G2/mitotic-specific cyclin 94 206 - -
Sebi1130g00006 346 Pfam Cyclin, N-terminal domain 81 206 IPR006671 -
Sebi1130g00006 346 SMART cyclin_7 219 305 IPR013763 -
Sebi1130g00006 346 SMART cyclin_7 116 200 IPR013763 -
Sebi1130g00006 346 PANTHER CYCLINS 75 324 IPR039361 -
Sebi1130g00006 346 SMART Cyclin_C_2 209 336 IPR004367 -
Sebi1130g00006 346 FunFam Cyclin superfamily protein, putative 207 280 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi1130g00006 Sebi-Chr1130 67349 69137 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi1130g00006 3 345 Core Cell Cycle Gene Families AT1G47230 52.925 1.29e-123 358
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi1130g00006 K06627 - gmx:100786875 398.667