Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi1130g00004 ATGGAGACCCGTGCAGCAAAGAAGAGGGCAAACGCTGCCGCACCAGTGTTACTGGGCAATAGACAAGTCAAGAGGCAACGTGTTGTGTTGGGGGAACTTCCCAATCTCCCCAATCTCATCCTTCCCCAATCTCCCCAAAAGCAGAAACTTCGATGCAGGAAGTATCCCCAGGACAAGAAACCAGCTCCTGCTGGTGACACACTGGATTTGAAGTCAGAGAATCCAGTTGACCATGATTCCCAGATTGGAGAATCTTATGCTTCGGACATCTTCACCTATCTTCGCATAATGGAGATGGAGAAAAAGAGAAGGCCAATTGTTGATTACATGGAGAGGGTTCAGAGAGATACTGTTACTACTAGCATGAGAGGGATATTGGTGGATTGGTTAGTAGAGGTTGCAGAGGAGTACAAGCTTCTCTCCGATACTCTTCATCTCTCTGTTTCATACATTGACAGGTTCCTATCTGTGAACCTTGTCAATAAGTCCAGGCTTCAATTGCTGGGTGTTTCCTCCATGCTCATTGCATCTAAGTATGAAGAAATTAACCCACCCAATGTGGAACAGTTTTGTAACATTACTGATAACACATACACCAAGTCAGAGGTTGTAAAGATGGAAGCTGACATACTCAAGTCCCTAAAGTTTGAAATGGGCAACCCTACTGTAATCACCTTTCTAAG 683 0.448 METRAAKKRANAAAPVLLGNRQVKRQRVVLGELPNLPNLILPQSPQKQKLRCRKYPQDKKPAPAGDTLDLKSENPVDHDSQIGESYASDIFTYLRIMEMEKKRRPIVDYMERVQRDTVTTSMRGILVDWLVEVAEEYKLLSDTLHLSVSYIDRFLSVNLVNKSRLQLLGVSSMLIASKYEEINPPNVEQFCNITDNTYTKSEVVKMEADILKSLKFEMGNPTVITFL 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi1130g00004 227 Gene3D - 103 219 - -
Sebi1130g00004 227 MobiDBLite consensus disorder prediction 40 80 - -
Sebi1130g00004 227 Pfam Cyclin, N-terminal domain 89 218 IPR006671 -
Sebi1130g00004 227 SUPERFAMILY Cyclin-like 81 218 IPR036915 -
Sebi1130g00004 227 ProSitePatterns Cyclins signature. 123 154 IPR006671 -
Sebi1130g00004 227 Gene3D - 89 227 - -
Sebi1130g00004 227 SMART cyclin_7 128 212 IPR013763 -
Sebi1130g00004 227 PANTHER CYCLINS 63 227 IPR039361 -
Sebi1130g00004 227 MobiDBLite consensus disorder prediction 51 78 - -
Sebi1130g00004 227 FunFam G2/mitotic-specific cyclin 105 219 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi1130g00004 Sebi-Chr1130 24266 25242 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi1130g00004 3 227 Core Cell Cycle Gene Families AT5G43080 58.590 3.81e-80 242
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi1130g00004 K06627 - gmx:547779 290.041