Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi112g00083 ATGGCTTCTTCTCCCAAGAGCTCTATCAAAATCCATGACCACTGCGTTGTAACTCCTTCACCATCAGATCAAACTCATCTATCTCTCCCTCTCACATTCTTTGATTTGTTTTGGCTCAAGTTTCATCCAGTTGAACGCATCTTCTACTACTACACCCTCCCTCTTCCTCTTTCAAACCCATCTTTTTTCTTTGACAAAGTGGTTCCAAAGCTCAAAACCTCACTCTCTCAAACCCTCCAACACTTCCTCCCTTTAGCTGGTAACATTGTTTGGCCTTCTGATTCCAACATACCCATCATCCAATTCAACCCTGGTGATGGGGTCTCCATGGTCCTAGCACAGTGTGATGCTGATGAAAATGCAAACTTCAATCAAATATTGGAACACAATTCAGCTCGTGAAGCCATAGAGTCTCGCAATTTGACACCCCACTTGGAATCATCAGATTCTTTTGCAGATGTTATCTCCCTGCAGATAACTCTGTTTCCAAACAGTGGCTTTTCCATTGGCATCAGCACCCACCATGCTGTTCTTGATGGAAAATCTTCAACCTTGTTCATCAAGGCCTGGGCTTCTATATGTAAATCAGATGAAAATTCACCATCTTTGGTGCCAAAGTTGAAGCCTTTTTTGGACAGAGAAGTCATCAAGGATCCAAATGGCCTTGAAAATTTGTTTATAAACAACTGGGTAGAAATCGCATCCCAATTTGACCCTTCAGGGAACAGCAACAGGAGAAGCTTGAAGATTATGCCAAACCCATCTGAACTAATCATGGATCAATCTTTCCGAGCCACGTTCGAGCTCACACGTGGTGATTTGGAGAATCTGAAGAAAAGGGTGTTATCCATGTGGGACATGGTGGAAGGAGCAGAACCAAATGAAGCAATTGATTCTTCAAAGCCAACAACTTTATCAACCTTTGTTATTACCTGTGCTTATGTTTCTGTTTGCATTGGTAAAGCGATTCAAGAAGCTGAAAAGGATAAACAAAAATTTGGTTTTGGATTCACTGTGGATTGCAGGGCTAGGTGGGAACCTCCAATCCCTGAGAATTATTTTGGCAATTGTGTATGTTCTCATATAGTGGATACAGAGCCAGAGGACTTCACAAAGGAAGATGGGTTAGTCATTGTTGCTAAGAAGATTTATAGTAAAATAAAGAAGTTGGAAGAAGGACCTCTTGATGGAGTTGAGACATTGATGTTTAGATTTATGACTATGGCAATTGAGGGAATTAAAGGAATAGGAGTTGCTGGGTCAACCAGGTTTGGAGTATATGGAATTGATTTTGGTTGGGGAAAGCCTTCTAAGGTGGAGATAGTATCAGTAGATAGAGGATTAACCATTGGCATGACAGAGAGAAAGGATGGGAAGGGTGGTGTTGAAGTTGGGCTTGTTCTTAATAAGCATGTGATGGCACTGTTTTCTACTTTTTTCCATGCAGGGTTATGCTTTGAGTGA 1464 0.4146 MASSPKSSIKIHDHCVVTPSPSDQTHLSLPLTFFDLFWLKFHPVERIFYYYTLPLPLSNPSFFFDKVVPKLKTSLSQTLQHFLPLAGNIVWPSDSNIPIIQFNPGDGVSMVLAQCDADENANFNQILEHNSAREAIESRNLTPHLESSDSFADVISLQITLFPNSGFSIGISTHHAVLDGKSSTLFIKAWASICKSDENSPSLVPKLKPFLDREVIKDPNGLENLFINNWVEIASQFDPSGNSNRRSLKIMPNPSELIMDQSFRATFELTRGDLENLKKRVLSMWDMVEGAEPNEAIDSSKPTTLSTFVITCAYVSVCIGKAIQEAEKDKQKFGFGFTVDCRARWEPPIPENYFGNCVCSHIVDTEPEDFTKEDGLVIVAKKIYSKIKKLEEGPLDGVETLMFRFMTMAIEGIKGIGVAGSTRFGVYGIDFGWGKPSKVEIVSVDRGLTIGMTERKDGKGGVEVGLVLNKHVMALFSTFFHAGLCFE 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi112g00083 487 Gene3D - 260 486 IPR023213 -
Sebi112g00083 487 Pfam Transferase family 9 477 - -
Sebi112g00083 487 SUPERFAMILY CoA-dependent acyltransferases 298 451 - -
Sebi112g00083 487 Gene3D - 8 242 IPR023213 -
Sebi112g00083 487 PANTHER - 9 484 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi112g00083 Sebi-Chr112 1703900 1705363 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi112g00083 9 480 Monolignol Biosynthesis Gene Families AT5G48930 23.868 1.40e-19 89.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi112g00083 - - gmx:100813762 649.047