Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi112g00031 ATGGGGATCATTCCTATGGTGAAGGTATTCTTACATGCTGTCATGGCAAAGAAGAGAAAGATGCAGCTTAGATGCCGAGATATGGAATGGTGGATGAGGAGGAGGCAGTTGCCATCGCGGTTAAGACAAAGAGTTCGCCATTTTGAACGTCAAAGATGGGCAGCCATGGGAGGAGAAGATGAGATGGAAATGATCAAAGACTTGCCTGAGGGTCTTAGGAGAGACATCAAGCGCTATCTTTGCCTAGACCTCATTAAAAAAGTACCTCTGTTCCACAACTTGGATGATCTTATTCTTGACAACATCTGTGACAGGGTGAAGCCCCTAGTCTTCTCTAAAGATGAAAAGATAATTAGAGAAGGTGACCCTGTACAAAGGATGGTGTTCATTGTTCGTGGACGCATAAGAAGGAACCAAAGTCTCAGCAAAGGCATGGTAGCCTCTAGTGTCCTTGAACCAGGAGGTTTTCTAGGTGATGAGCTACTTTCATGGTGTCTTCGGCGTCCATTCATAGATAGGCTCCCAGCTTCTTCAGCCACATTTGTGTGCCTTGAATCAGCAGAAGCTTTTGGCCTTGATGCTAATCACTTGAGGTACATCACTGATCACTTCCGTTACAAATTTGCTAATGAGAGGCTAAAGAGAACAGCAAGATATTACTCATCCAATTGGAGAACATGGGCTGCTGTCATCATTCAACTTTCTTGGAGACGTTACAGGAAGAGGACTAGAGGTCCAGTGACCCCTGTAAGGGAAAGTGGAGGCACTGAACGAAGGCTCTTGCAATATGCTGCAATGTTCATGTCAATAAAGCCACATGACCATCTTGAATGA 834 0.4484 MGIIPMVKVFLHAVMAKKRKMQLRCRDMEWWMRRRQLPSRLRQRVRHFERQRWAAMGGEDEMEMIKDLPEGLRRDIKRYLCLDLIKKVPLFHNLDDLILDNICDRVKPLVFSKDEKIIREGDPVQRMVFIVRGRIRRNQSLSKGMVASSVLEPGGFLGDELLSWCLRRPFIDRLPASSATFVCLESAEAFGLDANHLRYITDHFRYKFANERLKRTARYYSSNWRTWAAVIIQLSWRRYRKRTRGPVTPVRESGGTERRLLQYAAMFMSIKPHDHLE 277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi112g00031 277 CDD CAP_ED 90 200 IPR000595 -
Sebi112g00031 277 SMART cnmp_10 90 216 IPR000595 -
Sebi112g00031 277 Gene3D Jelly Rolls 88 206 IPR014710 -
Sebi112g00031 277 ProSiteProfiles cAMP/cGMP binding motif profile. 90 200 IPR000595 -
Sebi112g00031 277 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 6 244 - -
Sebi112g00031 277 SUPERFAMILY cAMP-binding domain-like 17 204 IPR018490 -
Sebi112g00031 277 Pfam Cyclic nucleotide-binding domain 110 198 IPR000595 -
Sebi112g00031 277 Gene3D Helix hairpin bin 16 81 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi112g00031 Sebi-Chr112 612706 614141 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi112g00031 4 277 Ion Channels AT5G15410 77.660 2.88e-155 448
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi112g00031 K05391 - gmx:100798823 510.76