Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi112g00027 ATGGATTCATCCTATTCCTTAGAGAAAGAGAAGCACTATGTGGGGGAAACAATCACCCCACAAAGAGATGACAATGATACCCTCTCTGCCATGGTGCTTGGTTTCAATGTGGTTTTCCCTGTAGTCCTTAACGCTGCAATTGAACTCAAACTATTTGAGATCATTGCCAAGGACAGTGATGATGGTGGTTTTATGTCAGCCTTTGAAATTGCTTCCAAGCTACCAACCAAACACTCTGACGTACCAAATAGGCTCGACCGTGTGCTCCGTTTGCTTGCTAGTTACTCTCTTCTCACTGTTTCCACTCTCACCAATGAGGATGGTAGAATGGTGATAGTTTATGGAATCTCATCATCTGGTAAATATTTTGTTGATGATGAGAACGGTGATGGTAATCTTGCTTCATTCGCATCATTCTCATGTCACCATACTTTGTCAGGGATGTGGCTGAATTTTGGAGAAGAAATTGTTGATCTTGAAATTGACATGCACAAGAAAGTTCATGGAAAATCTTTATACGAGTACATGGAGAAAGACCTAGAAATGAAGCAAGCATTTAACAAATCAATGAGTGATATATCCTCAATCCATATGAAAAGAATACTTGAAATATACACGGGATACGAGGGAGTATCAACTTTGATTGATGTTGGAGGTGGAAATGGACAAAGTCTCAAAATGATCATCTCTAAATACCCGTCAATCAAGGGAGTTAACTTTGAACTCCAACAAGTTATTGAAAATGCACCACCTTTTCATGGTAATTAA 768 0.3919 MDSSYSLEKEKHYVGETITPQRDDNDTLSAMVLGFNVVFPVVLNAAIELKLFEIIAKDSDDGGFMSAFEIASKLPTKHSDVPNRLDRVLRLLASYSLLTVSTLTNEDGRMVIVYGISSSGKYFVDDENGDGNLASFASFSCHHTLSGMWLNFGEEIVDLEIDMHKKVHGKSLYEYMEKDLEMKQAFNKSMSDISSIHMKRILEIYTGYEGVSTLIDVGGGNGQSLKMIISKYPSIKGVNFELQQVIENAPPFHGN 255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi112g00027 255 SUPERFAMILY "Winged helix" DNA-binding domain 24 127 IPR036390 -
Sebi112g00027 255 Gene3D Vaccinia Virus protein VP39 126 255 IPR029063 -
Sebi112g00027 255 Pfam Dimerisation domain 42 93 IPR012967 GO:0046983
Sebi112g00027 255 PANTHER O-METHYLTRANSFERASE 31 249 IPR016461 GO:0008168
Sebi112g00027 255 Pfam O-methyltransferase domain 150 252 IPR001077 GO:0008171
Sebi112g00027 255 Gene3D - 8 123 IPR036388 -
Sebi112g00027 255 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 31 255 IPR016461 GO:0008168
Sebi112g00027 255 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 145 251 IPR029063 -
Sebi112g00027 255 FunFam Caffeic acid 3-O-methyltransferase 7 123 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi112g00027 Sebi-Chr112 585424 587101 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi112g00027 18 254 Monolignol Biosynthesis Gene Families AT5G54160 43.515 1.35e-55 180
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi112g00027 - - gmx:100798295 317.005