Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi112g00025 ATGGGTTCCTATTCCGTAGAGAAAGAGAACCATGTGGTGGCCCCACAAAGGGATGACACTCATACCCTGTCTGCCATGGTGCTTGGTGCCAATATGGTGTTTCCAGCAGCACTTAATGCTGCAATTGAACTCAAACTATTTGAGATCATTGCTAAGGAAAGTTCACCACAAAATGGTGGATTCATGTCAGTCTTTGAAATTGCTTCAAAGCTACCAACTCAACATTCTGACTTGCCATATAGGCTTGACCGTGTGCTGCGTTTGCTTGCAAGTTACTCTCTTCTCTCTGTTTCCTCTCGCACCAATGAGGATGGAAGTGTCGTCAGAGTTTATGGCATCTCACCATCTGGAAAATATTTCTTCTTTGATGAAAATAGTGATGGCTATCTTGCCTCATTCACATCATTTTTATGTCACCCTGCACTCTCAGGGTTGTGGTTGAATTTTAAGGAAGCAGTTGTTGATCCTGAGATTGACCTATTCAAGAAAGTAAATGGAATATCTAAGTATGAGTACTTTGGTAAAGATGCACAACTAAACCATGTATTTAACAAATCAATGACCGATATCTGCTCAACTGAGATGAAAAGAATCCTTGAAATATACAAAGGATACGAAGGAATATCAACTTTGGTTGATGTAGGAGGTGGACATGGACAATGTCTCAAAATGATTATCTCCAAATACCCATCAATAAAGGCAATTAATTTTGACCTCCCACAAGTCATTGAAAATGCACCACACATTCCAGGGATTGAACATGTTGGAGGAAGTATGTTTGAAAGTGTTCCACAAGGGGATGCCATAGTACTAAAGGCTCTGCCACCAAATGGAAAGGTGATTATTGTAGAGTTGGTACTGCCAGAAGATCCAGAACCAACAAATGCATCAAGAATTGTTTCAATTCTTGATAACATCATGTTTATCACAGCTGGTGGAAGAGAAAGAACTGAGAAACAATATGAGATTTTGGGTAAACGCTCTGGATTTTCTAGGTTTCAAGTTGCTTGTCGCGCTTTCTCTATTTTGGGAGTGATGGAGCTTTACAAATAA 1053 0.3989 MGSYSVEKENHVVAPQRDDTHTLSAMVLGANMVFPAALNAAIELKLFEIIAKESSPQNGGFMSVFEIASKLPTQHSDLPYRLDRVLRLLASYSLLSVSSRTNEDGSVVRVYGISPSGKYFFFDENSDGYLASFTSFLCHPALSGLWLNFKEAVVDPEIDLFKKVNGISKYEYFGKDAQLNHVFNKSMTDICSTEMKRILEIYKGYEGISTLVDVGGGHGQCLKMIISKYPSIKAINFDLPQVIENAPHIPGIEHVGGSMFESVPQGDAIVLKALPPNGKVIIVELVLPEDPEPTNASRIVSILDNIMFITAGGRERTEKQYEILGKRSGFSRFQVACRAFSILGVMELYK 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi112g00025 350 Gene3D Vaccinia Virus protein VP39 123 350 IPR029063 -
Sebi112g00025 350 FunFam Caffeic acid 3-O-methyltransferase 4 120 - -
Sebi112g00025 350 PANTHER O-METHYLTRANSFERASE 25 333 IPR016461 GO:0008168
Sebi112g00025 350 Pfam Dimerisation domain 37 90 IPR012967 GO:0046983
Sebi112g00025 350 SUPERFAMILY "Winged helix" DNA-binding domain 19 124 IPR036390 -
Sebi112g00025 350 PIRSF O-mtase 3 350 IPR016461 GO:0008168
Sebi112g00025 350 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 129 346 IPR029063 -
Sebi112g00025 350 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 26 350 IPR016461 GO:0008168
Sebi112g00025 350 Pfam O-methyltransferase domain 146 272 IPR001077 GO:0008171
Sebi112g00025 350 Gene3D - 2 120 IPR036388 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi112g00025 Sebi-Chr112 569302 572033 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi112g00025 18 350 Monolignol Biosynthesis Gene Families AT5G54160 46.479 4.96e-97 290
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi112g00025 - - gmx:100798295 518.079