Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi112g00024 ATGGCTTCCTATGCTCCACTAAGAGATGACACTCATATCCTCTCTGCCATGGTGCTTGGTGCCAATATAGTCTTTCCTGTGGCCTTTAACGCTGCAATTGAGCTCAAACTATTTGATATAATTGCTAACGAAAGCTCACCAGAGAGTGGTGGATTCATGTCAGCCTTTGAAATTGCTTCCAAGCTACCAACTCAACACTCTGACTTGCCACATAGGCTTGACCGTTTGCTGCGTTTGCTTGCTAGTTACTCTCTTCTTACTGTTTCCACTCGCACCAATCAAGAAGGTGGTAGCGTTGTCATAGTTTATGGAATCTCACCATCTGGTAAATATTTTGTTGATGATGAAAACGGTGATGGTTTTCTTGCTTCTTTCACATCTTTTGTGTGTCACCCTGCAATGTTAGGGGTGTGGTTGAATTTCAAGGAAGCAATTGTCGAACCAGAGATTGACCTATTCAAGAAAGTTCACGGAATATCTGCATATGAGTACTTTGAGAAAGATCCACACATAAGCCATGTATTTAACAAGTCAATGACTGAAATAACCTCAACTCACATGAAAAGAATACTTGAAATGTATAATGGATACGAGGGAATATCAACTTTGGTTGATGTAGGGGGTGGAAATGGACAAAGTCTCAAAATGATTATCTCCAAATACCCATCAATAAAGGCGATTAATTTTGATCTCCCACAAGTGACTGAAAATGTACCACACTATCCAGGAATTGAGCATGTTGGAGGAAATATGTTCGAAAGCATTCCACAAGGAGATGCTATAATGCTAAAGGCCGTGTGCCATAATTGGTCGGATGAAAAATGCATAGAAATTTTAAGCAATTGTCACAAAGCTCTGCCATCAAATGGAAAGGTGATTATTGTGGAGTTCATACTGCCAGAAGATCCAAAACCAACAAATGCATCTAAAATGATTTCAATTCTTGATAACATCATGTTTATCACATCTGGTGGCATGGAAAGAACTGAGAAACACTATGAAAGTTTGGGAAAGCGCTCTGGATTTTCTAGGTTTAAATTTGTTTGTTGTGCTTTCTCTATCGTGGGGGTAATGGAGCTTTACAAATAA 1089 0.393 MASYAPLRDDTHILSAMVLGANIVFPVAFNAAIELKLFDIIANESSPESGGFMSAFEIASKLPTQHSDLPHRLDRLLRLLASYSLLTVSTRTNQEGGSVVIVYGISPSGKYFVDDENGDGFLASFTSFVCHPAMLGVWLNFKEAIVEPEIDLFKKVHGISAYEYFEKDPHISHVFNKSMTEITSTHMKRILEMYNGYEGISTLVDVGGGNGQSLKMIISKYPSIKAINFDLPQVTENVPHYPGIEHVGGNMFESIPQGDAIMLKAVCHNWSDEKCIEILSNCHKALPSNGKVIIVEFILPEDPKPTNASKMISILDNIMFITSGGMERTEKHYESLGKRSGFSRFKFVCCAFSIVGVMELYK 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi112g00024 362 Gene3D - 4 112 IPR036388 -
Sebi112g00024 362 FunFam Caffeic acid O-methyltransferase 116 362 - -
Sebi112g00024 362 Pfam O-methyltransferase domain 138 343 IPR001077 GO:0008171
Sebi112g00024 362 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 124 359 IPR029063 -
Sebi112g00024 362 Pfam Dimerisation domain 28 81 IPR012967 GO:0046983
Sebi112g00024 362 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 17 362 IPR016461 GO:0008168
Sebi112g00024 362 FunFam Caffeic acid 3-O-methyltransferase 2 112 - -
Sebi112g00024 362 PANTHER O-METHYLTRANSFERASE 16 345 IPR016461 GO:0008168
Sebi112g00024 362 SUPERFAMILY "Winged helix" DNA-binding domain 11 115 IPR036390 -
Sebi112g00024 362 PIRSF O-mtase 6 362 IPR016461 GO:0008168
Sebi112g00024 362 Gene3D Vaccinia Virus protein VP39 115 362 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi112g00024 Sebi-Chr112 561284 563614 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi112g00024 7 362 Monolignol Biosynthesis Gene Families AT5G54160 47.619 1.94e-110 325
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi112g00024 - - gmx:100798295 519.235