Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi112g00023 ATGGGTTCCTATTCCAAGAAAGAGAACCATGTGGTGAGAGATGATAATGATACCCTCTCTGCCATGGTGCTTGGTGCCAATGTGGTCTTTCCTGCAGCACTTAACGCTGCAATTGAACTCAAACTATTTGAGATCATTGCCAACGAAAGTGATGATGATGGTTTCATGTCAGCCTTTGAAATTGCTTCCAAGCTACCAACCAAACACTCTGATGTACCAAATAGGCTCGACCGTCTCCTGCGTTTGCTTGCTAGTTACTCTCTTCTCACTGTTTCCACTCGCACCAATGAGGATGGTAGCATAGTGAGAGTTTATGGGATCTCACCGTGTGGTAGATATTTCTTCCATGATGAAAATGGTGATGGTAATCTTGCTACATTCACATCATTCTTGTGTCACCGTGCATTGTTTGATGTATGGCTAAATTTTAAAGAAGCAATTATCGATCCTGAAGTTGACCTATTCAAGAAAGTTCATGGAACATCTAAGTTTGAGTACTTTGGGAATGATCCAGAAACAAACCACATATTTAACATAGCAATGGCTGATATATGCACATCCCATATGAGAAGAATACTTGAAATATACACAGGATTTGAAGGAATATCAACTTTGGTTGACGTGGCAGGTGGAACTGGACATGGTCTCAAAATGATAATCTCCAAATACCCTTTAATTAAAGGGATTAATTTTGACCTCCCTCAAGTGATTCAAAATGCACCACCATTTATAGGGATTGAGCATGTTGGAGGAAGTATGTTTGAAAGTATTCCACAAGGTGATGCCATAATATTAAAGGCTATATTGCATAACTGGTCAGATGAAAAATGTTTAGAAATTTTAAGCAATTGTCACAAAGCTTTACCAGCAAACGGGAAGGTCATTGTTGGGGAACTTATACTGCCTGAAGATCCTGAACCTACAGAAGAATATAAAATGCTTTCAATTCTTGATAACATCATGTTTATTACACCTGGTGGAAAGGAAAGAACTGCAAAACAGTATGAGGCTTTGGGCAAGCGCTCTGGATTTTCTAGGTTTCAAGTTGCATGTCGCGTTTTCTCTATTTTGGGTGTGATGGAGTTTTACAAATAA 1095 0.3909 MGSYSKKENHVVRDDNDTLSAMVLGANVVFPAALNAAIELKLFEIIANESDDDGFMSAFEIASKLPTKHSDVPNRLDRLLRLLASYSLLTVSTRTNEDGSIVRVYGISPCGRYFFHDENGDGNLATFTSFLCHRALFDVWLNFKEAIIDPEVDLFKKVHGTSKFEYFGNDPETNHIFNIAMADICTSHMRRILEIYTGFEGISTLVDVAGGTGHGLKMIISKYPLIKGINFDLPQVIQNAPPFIGIEHVGGSMFESIPQGDAIILKAILHNWSDEKCLEILSNCHKALPANGKVIVGELILPEDPEPTEEYKMLSILDNIMFITPGGKERTAKQYEALGKRSGFSRFQVACRVFSILGVMEFYK 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi112g00023 364 FunFam Caffeic acid O-methyltransferase 118 364 - -
Sebi112g00023 364 PANTHER O-METHYLTRANSFERASE 21 354 IPR016461 GO:0008168
Sebi112g00023 364 Gene3D - 2 114 IPR036388 -
Sebi112g00023 364 Gene3D Vaccinia Virus protein VP39 117 364 IPR029063 -
Sebi112g00023 364 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 22 364 IPR016461 GO:0008168
Sebi112g00023 364 FunFam Caffeic acid 3-O-methyltransferase 2 114 - -
Sebi112g00023 364 SUPERFAMILY "Winged helix" DNA-binding domain 16 118 IPR036390 -
Sebi112g00023 364 PIRSF O-mtase 2 364 IPR016461 GO:0008168
Sebi112g00023 364 Pfam O-methyltransferase domain 140 345 IPR001077 GO:0008171
Sebi112g00023 364 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 123 361 IPR029063 -
Sebi112g00023 364 Pfam Dimerisation domain 33 84 IPR012967 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi112g00023 Sebi-Chr112 535352 537993 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi112g00023 12 356 Monolignol Biosynthesis Gene Families AT5G54160 48.844 3.57e-111 327
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi112g00023 - - gmx:100798295 541.191