Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi112g00002 ATGGAAGGATCACAAGGTGTGAGGAAAGGCGCATGGAGTAAATTTGAAGATGATCTTCTCAAAGCATGTGTCCAACAATATGGAGAGGGAAAATGGCACCTAGTTCCTCAAAGAACAAGGTTGAATAGATGCCGCAAGAGTTGTAGATTGAGATGGTTGAATTACCTAAAACCAAATATCAAGAGGGGAGATTTTAGTGAAGATGAGGTTGATTTGATGATCAGATTGCATAAGCTTTTGGGAAACAGATGGTCCCTGATAGCTGGAAGACTTCCTGGAAGAACTGCAAATGATGTGAAAAATTACTGGAACACTCACATGCGCAGTAAAGTAGACTCACAGGCACATAGCAAGAAAGAAGACAAGCAAGAAGAGACTGAAAGAGTGAAACCCCACGAAGTGATAAAGCCTGTGCCTCGAACTTTGTCAAAAGCATCTTCACAAGGGAAACTCAATATTTTTGCTTCTGCAGATCAGAGTGATAGTTGCAAAGTTAATATAATTAGCAGTGAAGGAGCTTCTTCATCAGGGAAGAATTGGTGGGAAACTTTGTAG 555 0.4072 MEGSQGVRKGAWSKFEDDLLKACVQQYGEGKWHLVPQRTRLNRCRKSCRLRWLNYLKPNIKRGDFSEDEVDLMIRLHKLLGNRWSLIAGRLPGRTANDVKNYWNTHMRSKVDSQAHSKKEDKQEETERVKPHEVIKPVPRTLSKASSQGKLNIFASADQSDSCKVNIISSEGASSSGKNWWETL 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi112g00002 184 SUPERFAMILY Homeodomain-like 6 103 IPR009057 -
Sebi112g00002 184 ProSiteProfiles Myb-like domain profile. 4 56 IPR001005 -
Sebi112g00002 184 FunFam Transcription factor MYB113 64 134 - -
Sebi112g00002 184 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 57 111 IPR017930 -
Sebi112g00002 184 SMART sant 61 109 IPR001005 -
Sebi112g00002 184 SMART sant 8 58 IPR001005 -
Sebi112g00002 184 Gene3D - 63 136 - -
Sebi112g00002 184 CDD SANT 11 56 IPR001005 -
Sebi112g00002 184 ProSiteProfiles Myb-like domain profile. 57 107 IPR001005 -
Sebi112g00002 184 FunFam Myb transcription factor 9 61 - -
Sebi112g00002 184 CDD SANT 65 107 IPR001005 -
Sebi112g00002 184 Gene3D - 9 61 - -
Sebi112g00002 184 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 4 56 IPR017930 -
Sebi112g00002 184 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 5 156 - -
Sebi112g00002 184 MobiDBLite consensus disorder prediction 108 134 - -
Sebi112g00002 184 MobiDBLite consensus disorder prediction 111 134 - -
Sebi112g00002 184 Pfam Myb-like DNA-binding domain 9 56 IPR001005 -
Sebi112g00002 184 Pfam Myb-like DNA-binding domain 62 106 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi112g00002 Sebi-Chr112 118366 120054 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi112g00002 2 158 MYB Transcription Factor Family AT1G66370 59.006 1.14e-63 195
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Sebi112g00002 Myb_DNA-binding 1.3e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi112g00002 - K16166 gmx:100781091 257.684