Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi1126g00004 ATGTCTGATGAAGGAATGCGCAGTGGTGAAATGGGAGTAGATCATCACGATATGATTTATAAGAATAATGGTACCTTACAAGATAATAATGGCAATGGATCCAAAACGTTGTCTTCTGAACATTCTGGAGATGCTAATGTTACTTCATCTGACTCTTATTCCCAACAGCTATTATTGAATTTTGGAGGAGTCAACATGCCCCGAGCAAGTGACCTTCTTTTTGGAGTCTCAATCTTTGCTGAAGCAACAAAGGCTAAAATCATTGATTTTGTACATTCAGCTTTTGATGAGTTGTTGAAGATAGGAGTTGTAGGGAAACCTTTATGGCATTCCCAGGTAGACTATGGATTCGAGATTCTCAATGATATTGAATACTTGAGACAATTTGGTCAGGTTGATACAACACTAAGGGAGATTATGAAGTTAGTTGAGGTTAATGAGCCTCAAACATTGCCAAGCTTTGACTCATTTGGAACTCCGCACCCAACATCAGAGCCAGCTTATGAAGCAGCTTTGGGGATTGAAGCTTCACGTGAAACTGCATTTGTTAACATGAGTCCAATCAGCCTTGTTGAATTACTTATGGATGTGAATCAATGGTCGAGAGTATTTCACAAACTTGTCTCAAGGGCAACGGTTTTGCTAACCTTTTTAGAGGGAGTGGAAGGAAGCTGTGATGGGAAATTGCACGTG 693 0.3997 MSDEGMRSGEMGVDHHDMIYKNNGTLQDNNGNGSKTLSSEHSGDANVTSSDSYSQQLLLNFGGVNMPRASDLLFGVSIFAEATKAKIIDFVHSAFDELLKIGVVGKPLWHSQVDYGFEILNDIEYLRQFGQVDTTLREIMKLVEVNEPQTLPSFDSFGTPHPTSEPAYEAALGIEASRETAFVNMSPISLVELLMDVNQWSRVFHKLVSRATVLLTFLEGVEGSCDGKLHV 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi1126g00004 231 ProSiteProfiles START domain profile. 80 214 IPR002913 GO:0008289
Sebi1126g00004 231 MobiDBLite consensus disorder prediction 22 49 - -
Sebi1126g00004 231 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 49 231 IPR042160 -
Sebi1126g00004 231 MobiDBLite consensus disorder prediction 20 49 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi1126g00004 Sebi-Chr1126 78259 79559 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi1126g00004 69 231 Homeobox Transcription Factor Family AT4G21750 38.037 8.10e-22 91.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi1126g00004 K09338 - pvu:PHAVU_005G093100g 179.874