Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi1125g00002 ATGGCAGCGGTGGCTTCCGTGGACAAGCGTTTGTACAGTACTAGCCCCAAACACGGTGTCGCTCGGATCTTCGAGTCAAGCCAGGATGTGATGCGTGGGATGAAAAAGACACCGGAACCGCTGTTGCTATCGGATTCCTCAACCGATGAGGAAGATGGAAATGATCTGAAGAAGGACCTGATTAGAAAGGGAAACAACGAGTTGAAGCGTCCATCTTCGATCCTCGCGACGAGGGAACCTTGGACCACTGGATCCACGGAGCGCCTCTCTTATCCGCCTCACAGGAAAGCACCCTTTCAACTCAGAGCCACCACTCTCACGCCTCATGCACCATGGCTTCAATCACCCCCTGTCCCAATCCACTATGTCCGTAACCATGGGCCCGTTCCCAAGGCCCGTTGGGAAGACTGGACCGTTGAGGTCTGCGGCCTAGTTAAGCGCCCGGCCCAGTTCACCATGGATCAGCTGGTCCACGACTTCCCCAGCCGAGAGTTCCCTGTTACACTCGTCTGTTCGGCTAACCGTCGCAAGGAGCTCAACATGGTGAAACAGAGCATCGGCTTCAACTGGGGACCTGCTGCCACTTCCACTTCTGTGTGGCGTGGTGTACCGTTGAGGAGCGTGCTCAAGCGATGTGGGATTTATAGCCGCAATAGTGGGGCCCTCTATGTTTGCTTCGAAGGCGCGGATGAGCTGCCAGGTGGCGGTGGGTCCAACTACGGGACAAGTATCCTGAGGGAGGTTGCACTGGATCCCTCCCGCGACATCATCCTCGCTTACATGCAAAACGGTGAGCTTTTGGCTCCGGATCATGGGTTTCCATTACGGGTCATAATACCGGGTTTCACTGGTGGCCGCATGGTGAAATGGTTGAAGCGCATAGTTGTCACTACCCATGAATCTGACAGCTATTACCATTACCATGACAACAGAACACTTCCCTCCCACGTTGATGCTGAGCTTGCTAATGCAGAAGGTTGGTTCTACAAGCCAGAGTATGTTATCAATGAGATGAACATAAACTCAGTGATAACAACGCCGTGCCACGACGAGATCTTGCCCATTAACTCGTGGACTACTCAGAGGCCTTATGTACTAAGAGGCTTCGCATATTCCGGGGGTGGGAGAAAGGTGACACGTGTTGAGGTGACAATGGATGATGGTGAAATATGGCAAGTATGCAAGTTGAACCATCTAGAGAAACCAAACAAATATGGTAAGTATTGGTGTTGGTGCTTCTGGTCCTTGGAAGTTGAGGTGTTTGATATACTTCGAGCCAAAGAAATTGCGGGCATGATGAACAATTGCTGGTTCAAAGTCAAAACTAACGTGTGCAGGCCCCACAAGGGAGAGATGGGCATAGTGTTCGAGCACCCGACCCAACCAGGTAACCATTCTGGTGGTTGGATGGCTAAAGAAAGACTCCTAGATAAATCATCAGAGTCTACCCCAACTCTTAAGAAGAGTGTCTCCTCAACATTCATCAACACTACTAGCTCTAAAACATATACCATGTCTGAGGTTATAAGGCATAACAACGCCGATTCGGCTTGGATCGTCGTCCACGACCATGTCTACGATTGCACTCACTACCTCAAGGACCACCCTGGTGGCATCGACAGCATACTCATCAATGCCGGCACTGATTGTACTGAGGAGTTTGAAGCCATCCACTCTGACAAAGCTAAGAAAATGATTGAGGTTTATCAAATTGGCAAGCTCGTGACCACTAACTACCCTTCTGACTCGTTGCTTGATAACTCTATTGTGGCTCTAATAAACCCACGCGAGAAGATCGCATGCAAGCTCCTATCAAAAACGTCCATCTCCCACGACGTTAGGATCTTACGTTTTGCATTGCCTTCCAAGGATCAAATATTGGGTTTGCCAATAGGGAAACACATATTCTTATGTGCCACCATTAACGAGAAGCTATGCATGCGAGCTTACACTCCAACAAGCACCGATGATGAAGTGGGGTACTTCGATCTAGTGGTCAAGATTTACTTCAAAGGGGTGCACCAAAAGTTCCCTAATGGTGGCCTTATGTCTCAACACTTAGACTCTCTACCTATTGGATCAATCTTGAATGTGAAAGGTCCATTGGGCCACATAGAATACATTGGAAAAGGAAACTTTCTTATTCATGGAAAACACAAGTTTGCCAAGAGGCTGGCCTTGTTGGCTGGTGGTACTGGGATCACACCTATTTACCAAGTGATCCAAGCGATTCTTAAGGATCCAGAAGATCACACCGAAATGCACTTCATATATGCAAATCGAACTGAGGATGATATACTGTTGAGGGAAGAGATCGATGCATGGGCTAAAGAGCATGAACAACTCAAGGTGTGGTATGTGGTACAGGAAAGCGTAAAAGAAATGTGGCAATATAGTGTAGGTTTCATCACAGAAAGTATCCTAAGGGAACATATTCCTAAAGCATCCCAAGATACATTGGCTTTGGCCTGTGGACCATCACCTATGATTCAGTTTGCAGTGCAACCAAAATTGGAGAGGTTAGGTTATGATATCAAGAACAATTTGTTTGTGTTTTAA 2559 0.4799 MAAVASVDKRLYSTSPKHGVARIFESSQDVMRGMKKTPEPLLLSDSSTDEEDGNDLKKDLIRKGNNELKRPSSILATREPWTTGSTERLSYPPHRKAPFQLRATTLTPHAPWLQSPPVPIHYVRNHGPVPKARWEDWTVEVCGLVKRPAQFTMDQLVHDFPSREFPVTLVCSANRRKELNMVKQSIGFNWGPAATSTSVWRGVPLRSVLKRCGIYSRNSGALYVCFEGADELPGGGGSNYGTSILREVALDPSRDIILAYMQNGELLAPDHGFPLRVIIPGFTGGRMVKWLKRIVVTTHESDSYYHYHDNRTLPSHVDAELANAEGWFYKPEYVINEMNINSVITTPCHDEILPINSWTTQRPYVLRGFAYSGGGRKVTRVEVTMDDGEIWQVCKLNHLEKPNKYGKYWCWCFWSLEVEVFDILRAKEIAGMMNNCWFKVKTNVCRPHKGEMGIVFEHPTQPGNHSGGWMAKERLLDKSSESTPTLKKSVSSTFINTTSSKTYTMSEVIRHNNADSAWIVVHDHVYDCTHYLKDHPGGIDSILINAGTDCTEEFEAIHSDKAKKMIEVYQIGKLVTTNYPSDSLLDNSIVALINPREKIACKLLSKTSISHDVRILRFALPSKDQILGLPIGKHIFLCATINEKLCMRAYTPTSTDDEVGYFDLVVKIYFKGVHQKFPNGGLMSQHLDSLPIGSILNVKGPLGHIEYIGKGNFLIHGKHKFAKRLALLAGGTGITPIYQVIQAILKDPEDHTEMHFIYANRTEDDILLREEIDAWAKEHEQLKVWYVVQESVKEMWQYSVGFITESILREHIPKASQDTLALACGPSPMIQFAVQPKLERLGYDIKNNLFVF 852
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi1125g00002 852 Gene3D - 105 336 IPR036374 -
Sebi1125g00002 852 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 726 745 IPR001709 GO:0016491
Sebi1125g00002 852 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 752 761 IPR001709 GO:0016491
Sebi1125g00002 852 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 820 828 IPR001709 GO:0016491
Sebi1125g00002 852 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 796 812 IPR001709 GO:0016491
Sebi1125g00002 852 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 648 655 IPR001709 GO:0016491
Sebi1125g00002 852 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 534 544 IPR001709 GO:0016491
Sebi1125g00002 852 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 764 775 IPR001709 GO:0016491
Sebi1125g00002 852 SUPERFAMILY Oxidoreductase molybdopterin-binding domain 113 335 IPR036374 -
Sebi1125g00002 852 ProSitePatterns Cytochrome b5 family, heme-binding domain signature. 531 538 IPR018506 GO:0020037
Sebi1125g00002 852 Gene3D Translation factors 588 702 - -
Sebi1125g00002 852 FunFam NADH-cytochrome b5 reductase 586 702 - -
Sebi1125g00002 852 SUPERFAMILY E set domains 337 444 IPR014756 -
Sebi1125g00002 852 ProSitePatterns Eukaryotic molybdopterin oxidoreductases signature. 143 178 IPR022407 GO:0043546
Sebi1125g00002 852 ProSiteProfiles Cytochrome b5 family, heme-binding domain profile. 500 575 IPR001199 -
Sebi1125g00002 852 CDD cyt_b5_reduct_like 601 852 - -
Sebi1125g00002 852 Gene3D - 495 579 IPR036400 -
Sebi1125g00002 852 Pfam Cytochrome b5-like Heme/Steroid binding domain 504 574 IPR001199 -
Sebi1125g00002 852 Pfam Oxidoreductase NAD-binding domain 727 834 IPR001433 GO:0016491
Sebi1125g00002 852 Pfam Oxidoreductase FAD-binding domain 601 707 IPR008333 -
Sebi1125g00002 852 Gene3D - 430 493 - -
Sebi1125g00002 852 Gene3D - 337 429 - -
Sebi1125g00002 852 FunFam Nitrate reductase [NADH] 703 852 - -
Sebi1125g00002 852 SUPERFAMILY Riboflavin synthase domain-like 590 709 IPR017938 -
Sebi1125g00002 852 PANTHER NADH-CYTOCHROME B5 REDUCTASE 484 849 IPR001834 GO:0016491
Sebi1125g00002 852 MobiDBLite consensus disorder prediction 26 55 - -
Sebi1125g00002 852 SUPERFAMILY Cytochrome b5-like heme/steroid binding domain 497 578 IPR036400 -
Sebi1125g00002 852 PRINTS Cytochrome B5 reductase signature 648 655 - -
Sebi1125g00002 852 PRINTS Cytochrome B5 reductase signature 764 775 - -
Sebi1125g00002 852 PRINTS Cytochrome B5 reductase signature 693 707 - -
Sebi1125g00002 852 PRINTS Cytochrome B5 reductase signature 726 745 - -
Sebi1125g00002 852 PRINTS Cytochrome B5 reductase signature 820 828 - -
Sebi1125g00002 852 PRINTS Cytochrome B5 reductase signature 627 638 - -
Sebi1125g00002 852 FunFam Nitrate reductase 111 327 - -
Sebi1125g00002 852 PRINTS Eukaryotic molybdopterin domain signature 114 130 IPR008335 GO:0016491
Sebi1125g00002 852 PRINTS Eukaryotic molybdopterin domain signature 380 392 IPR008335 GO:0016491
Sebi1125g00002 852 PRINTS Eukaryotic molybdopterin domain signature 251 267 IPR008335 GO:0016491
Sebi1125g00002 852 PRINTS Eukaryotic molybdopterin domain signature 268 281 IPR008335 GO:0016491
Sebi1125g00002 852 PRINTS Eukaryotic molybdopterin domain signature 178 190 IPR008335 GO:0016491
Sebi1125g00002 852 PRINTS Eukaryotic molybdopterin domain signature 407 417 IPR008335 GO:0016491
Sebi1125g00002 852 PRINTS Eukaryotic molybdopterin domain signature 366 380 IPR008335 GO:0016491
Sebi1125g00002 852 PRINTS Eukaryotic molybdopterin domain signature 193 208 IPR008335 GO:0016491
Sebi1125g00002 852 PRINTS Eukaryotic molybdopterin domain signature 284 297 IPR008335 GO:0016491
Sebi1125g00002 852 PRINTS Eukaryotic molybdopterin domain signature 335 347 IPR008335 GO:0016491
Sebi1125g00002 852 PRINTS Eukaryotic molybdopterin domain signature 167 178 IPR008335 GO:0016491
Sebi1125g00002 852 PRINTS Cytochrome B5 signature 525 535 IPR001199 -
Sebi1125g00002 852 PRINTS Cytochrome B5 signature 550 557 IPR001199 -
Sebi1125g00002 852 PRINTS Cytochrome B5 signature 562 574 IPR001199 -
Sebi1125g00002 852 PRINTS Cytochrome B5 signature 535 549 IPR001199 -
Sebi1125g00002 852 SUPERFAMILY Ferredoxin reductase-like, C-terminal NADP-linked domain 696 847 IPR039261 -
Sebi1125g00002 852 FunFam Sulfite oxidase, mitochondrial 498 579 - -
Sebi1125g00002 852 Pfam Mo-co oxidoreductase dimerisation domain 333 429 IPR005066 GO:0016491|GO:0030151
Sebi1125g00002 852 Gene3D - 703 852 IPR039261 -
Sebi1125g00002 852 ProSiteProfiles Ferredoxin reductase-type FAD binding domain profile. 596 708 IPR017927 GO:0016491
Sebi1125g00002 852 Pfam Oxidoreductase molybdopterin binding domain 126 305 IPR000572 -
Sebi1125g00002 852 SMART Cyt_b5_2 503 575 IPR001199 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi1125g00002 Sebi-Chr1125 47509 54112 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi1125g00002 593 843 NADPH P450 reductases AT5G17770 38.340 2.73e-48 171
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi1125g00002 K10534 - gmx:732634 1283.09