Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi1125g00001 ATGGGTGATGATAGTATTGATTTAACTACACCAACCAAAGGTTTAAATGATCCAGTTGATACGTTGGAGGAATGGGTTCCAAAGTGTGATGAAGAAATCAAACCTGTAGTTGGCAAAGTCTTTGATACTTTAGAACAAGGAGGGGACTTTTATCAAAGGTATGCACATACTGCTGGTTTTAGTGTACGCAAAGCAACTGAAACAAAAGATAAAAATGGAGAAACAAAGTGGAAATATTTTCTTTGCTCTAAAGAAGGCTTCAAATTAGAAACAAAAGAGGGTCTAACTGAGTTGCTTGTTGATGATAAAAAATTGCCTAAAACCAGACGAAGAAAACTAACAAGGGAAGGGTGTAATGCAAGGATTGTTTTTAAGAGGACACAAGAAGGAAAATATGAAGTGGTGCGATTTCATGAAG 418 0.3612 MGDDSIDLTTPTKGLNDPVDTLEEWVPKCDEEIKPVVGKVFDTLEQGGDFYQRYAHTAGFSVRKATETKDKNGETKWKYFLCSKEGFKLETKEGLTELLVDDKKLPKTRRRKLTREGCNARIVFKRTQEGKYEVVRFHE 139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi1125g00001 139 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 28 138 - -
Sebi1125g00001 139 Pfam FAR1 DNA-binding domain 49 138 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi1125g00001 Sebi-Chr1125 26410 26827 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Sebi1125g00001 FAR1 6.5e-18 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi1125g00001 - - vvo:131661002 167.548