Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi1124g00008 GTTATATTCTACGAGCAAGATTGGAATCCACAGGTGGACAAGCAAGCTTTGCAGAGAGCGCATAGAATTGGCCAGATGAACCACGTTTTGTGTATAAACCTTGTTACAGAACGTACAGTGGAGGAAGTAATTATGCGGAGGGCAGAAAGAAAATTGCAGCTGAGCCTCAATGTTATAGGTGATAATATTCTGGAACATGAAGATAAAGAAACATCTATAGTTGGAACAGGTGATTTGAAATCCATCATATTTGGGATACGGATGTTTGATCCCACTGAGATCAATGATGGAAAACACTGCGATATGGACTTATCAGAAATTACTGCTATGGCTGACAAGGTGATTGCTATGCGTGATCAACAATTATTTGACAAGGATGACAGGAAATTTGAGGTCAATCCAAGAAACTTTTTAAAAGGATATGATGTTAAGGAAGGAGGTTCTGCTTCTCTCTCTTGTGATCTTGATCTTGATGAGGCTTCATATCTTTCTTGGGTTAAAAAATTTGAGGAAGTGTCTAATTCAAGTTGTGACTCAATCATGGACTTGAGGAGCAGAAAGAACTTAGATGAAGAGAAGAGTCTAAAACTTGAGATTGCAAAGAAGAAGGCAGAGGAAAAGAAGCTGTCTAAGTGGGAAGCTCTTGGATACCATTCATTGAATGTGAAAGACCCTATCAGCCCACCAGATGGTGATATTACATCAGCTACTGGTTCTGTTCATTTTGTATACGGAGATTGTACAGCTCCATCAAACGTTTGTTCATCTGAACCTGCTGTAATATTCAGGTCAACTTTTTATTTGCCTGGCTGCAACTTTTGCTATGATGCACTTATTTTAATAACTACATTGGCAAAATAA 861 0.3856 VIFYEQDWNPQVDKQALQRAHRIGQMNHVLCINLVTERTVEEVIMRRAERKLQLSLNVIGDNILEHEDKETSIVGTGDLKSIIFGIRMFDPTEINDGKHCDMDLSEITAMADKVIAMRDQQLFDKDDRKFEVNPRNFLKGYDVKEGGSASLSCDLDLDEASYLSWVKKFEEVSNSSCDSIMDLRSRKNLDEEKSLKLEIAKKKAEEKKLSKWEALGYHSLNVKDPISPPDGDITSATGSVHFVYGDCTAPSNVCSSEPAVIFRSTFYLPGCNFCYDALILITTLAK 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi1124g00008 286 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 109 IPR027417 -
Sebi1124g00008 286 Gene3D - 1 125 IPR027417 -
Sebi1124g00008 286 PANTHER CHROMODOMAIN-HELICASE-DNA-BINDING PROTEIN 1-LIKE 1 144 IPR031053 GO:0003678|GO:0006281|GO:0006338
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi1124g00008 Sebi-Chr1124 56842 57789 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi1124g00008 8 83 RAD5 or RAD16-like Gene Family AT1G02670 36.842 2.69e-08 52.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi1124g00008 K20092 - gmx:100797182 407.527