Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi1121g00001 ATGCCCTGCCCTGGCTGTGATGGTTCGGTGCTTCTTGATGATACAGAAGATTTCACAGGTGAAAAGAATGCCCTCCCTAATCGCAATTCAATTAGAGGGTTTGAAGTGATTGATAACATAAAAGAAGCAGTTGAGAGGGCATGCCCATCCACAGTATCCTGTGCTGATATATTAGCCTTTGCAGCTAGGGAAGCTGTTTTTCTGTCAGGAGGGCCTTTTTGGGCGGTTCCATTAGGGAGACGTGATGCAATAACAACCAGTCAAACAGCAGCTAATCAACAGATTCCTTCACCTTTTGAGCCTTTAGAAAACATCACTGCAAAGTTCGCTTCAAAGGGTCTTGACTTGAACGATCTTGTAGTCCTATCAGGGGGACATACTATTGGTTTTGCTCAATGCTTCACCTTCAAAAGGAGGCTTTTTGACTTTCAAGGCTCTGGCAAACCTGATCCTCTGCTTGACTCTTCAATGCTCTCAAAATTGCAAACCATGTGTCCAAATAAAGACACTTCAAACAGCAATATAGCTCCTCTTGATGCAACAAGCACTTTCAAGTTTGACAATGCTTATTACACAAATCTTGTAAGCAACTCAGGGCTTCTTGATTCTGACCAAGCACTAATTGGGGATCCAAGGACTGCTGCTATGGTTAATTATTACAGCACCAACCAATTTTCATTCTATAATGATTTTGCTGCATCCATGGTCAAGCTTAGTAATGTTGGGGTACTTACAGGTGAAAATGGCCAAATTAGAAAGAAATGTGGCTTTGTGAATTAA 780 0.4179 MPCPGCDGSVLLDDTEDFTGEKNALPNRNSIRGFEVIDNIKEAVERACPSTVSCADILAFAAREAVFLSGGPFWAVPLGRRDAITTSQTAANQQIPSPFEPLENITAKFASKGLDLNDLVVLSGGHTIGFAQCFTFKRRLFDFQGSGKPDPLLDSSMLSKLQTMCPNKDTSNSNIAPLDATSTFKFDNAYYTNLVSNSGLLDSDQALIGDPRTAAMVNYYSTNQFSFYNDFAASMVKLSNVGVLTGENGQIRKKCGFVN 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi1121g00001 259 ProSitePatterns Peroxidases proximal heme-ligand signature. 118 128 IPR019793 -
Sebi1121g00001 259 SUPERFAMILY Heme-dependent peroxidases 4 259 IPR010255 GO:0004601|GO:0006979|GO:0020037
Sebi1121g00001 259 Gene3D Peroxidase, domain 2 96 238 - -
Sebi1121g00001 259 CDD secretory_peroxidase 5 258 IPR033905 GO:0004601|GO:0042744
Sebi1121g00001 259 PANTHER PEROXIDASE 72-RELATED 5 257 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sebi1121g00001 259 Gene3D - 5 259 - -
Sebi1121g00001 259 PRINTS Plant peroxidase signature 51 61 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sebi1121g00001 259 PRINTS Plant peroxidase signature 193 210 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sebi1121g00001 259 PRINTS Plant peroxidase signature 32 45 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sebi1121g00001 259 PRINTS Plant peroxidase signature 70 85 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sebi1121g00001 259 PRINTS Plant peroxidase signature 117 129 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sebi1121g00001 259 PRINTS Plant peroxidase signature 233 246 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sebi1121g00001 259 PRINTS Plant peroxidase signature 177 192 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sebi1121g00001 259 Pfam Peroxidase 5 222 IPR002016 GO:0004601|GO:0006979|GO:0020037
Sebi1121g00001 259 ProSiteProfiles Plant heme peroxidase family profile. 5 259 IPR002016 GO:0004601|GO:0006979|GO:0020037
Sebi1121g00001 259 PRINTS Haem peroxidase superfamily signature 52 69 IPR002016 GO:0004601|GO:0006979|GO:0020037
Sebi1121g00001 259 PRINTS Haem peroxidase superfamily signature 70 82 IPR002016 GO:0004601|GO:0006979|GO:0020037
Sebi1121g00001 259 PRINTS Haem peroxidase superfamily signature 179 194 IPR002016 GO:0004601|GO:0006979|GO:0020037
Sebi1121g00001 259 PRINTS Haem peroxidase superfamily signature 118 133 IPR002016 GO:0004601|GO:0006979|GO:0020037
Sebi1121g00001 259 FunFam Peroxidase 96 238 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi1121g00001 Sebi-Chr1121 38521 41017 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi1121g00001 5 257 Peroxidase AT1G49570 66.667 2.01e-125 358
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi1121g00001 K00430 - qsa:O6P43_011686 412.92