Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi1120g00001 ATGGGTATTCGTGATAATTTGACTAGTATTGGTGTGGGAGGAAGAGGACCACAAGTAGTTGCACTAGCTTGTAAAATGGTTGGAGGTGGCAGTGATGGCTCACTGGATCTCTGTGCAAGAGTCTGTTTAATTGATGAGCATGAGAACATCATCTTCCATTCTTACGTGAAGCCACCAATTCCTGTCACAAACTATAGGTATGAGACAACAGGCATTAGACAAGAACACTTGAGGGATGCAATGCCAATGAGACTAGTTCAGAGGAGGATTCAAGACTTCCTTTGCAATGGAGAACCAATGTGGACTATTCGACCAAGAGGTGGAAAAGCCAGGATTCTTGTGGGTCATGGTTTAGATCATGACCTTGCATGTTTGCAAATAGAATATCGAGCTGAAAAAATAAGGGACACTGCAAAATACCCTCCTCTGATGAAAACAAGCAAGCTGAGCAACTCACTCAAGTATGACATTCAAACCGGGATACAGGATCCTTATGATGATTGTGTTGCAACAATGAGGCTCTACATGAGAATGAGATCACAAGTACACAAAATAGAGGATTACCCTTTGGCATCAGACCCTCAGAACAGGAATAATTTTGCTTCGTGGAGGCAAAGTGAACTTGAAAGAATGACTCCTGAACAAATGCTAGAAATCTCAAGGTCTGACTACTACTGCTGGTGCTTGGATTCCTTTTATAGTCCCTGA 708 0.4237 MGIRDNLTSIGVGGRGPQVVALACKMVGGGSDGSLDLCARVCLIDEHENIIFHSYVKPPIPVTNYRYETTGIRQEHLRDAMPMRLVQRRIQDFLCNGEPMWTIRPRGGKARILVGHGLDHDLACLQIEYRAEKIRDTAKYPPLMKTSKLSNSLKYDIQTGIQDPYDDCVATMRLYMRMRSQVHKIEDYPLASDPQNRNNFASWRQSELERMTPEQMLEISRSDYYCWCLDSFYSP 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi1120g00001 235 CDD REX4_like 20 175 IPR037431 GO:0006364|GO:0008408
Sebi1120g00001 235 Gene3D - 16 192 IPR036397 GO:0003676
Sebi1120g00001 235 Pfam Exonuclease 38 140 IPR013520 -
Sebi1120g00001 235 SUPERFAMILY Ribonuclease H-like 32 180 IPR012337 -
Sebi1120g00001 235 PANTHER RNA EXONUCLEASE REXO1 / RECO3 FAMILY MEMBER-RELATED 17 230 IPR047021 GO:0004527
Sebi1120g00001 235 SMART exoiiiendus 18 184 IPR013520 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi1120g00001 Sebi-Chr1120 33987 35199 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi1120g00001 1 232 C2H2 Transcription Factor Family AT3G27970 72.083 7.30e-129 366
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi1120g00001 - - aprc:113862359 451.055