Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi111g00094 ATGGGACCAGGTGGATTAGGGGATATTCAATACCCACATGACCCAGAAGAAGTGCTTGGAGTGCCAGGAGGTATTTTGTGGACAACTCTAGTGTCAAGGAGACAACTTAGCGGAAGACATGGATTGGTTCTACCGGTGAGGATTGTAAATGGATACCTGGTGCAAGACCAAAGAGAAATTCAAATCAAGATTCCTAATGGTCAGATCCAGTCCTTGGAGCTTGTTTGGAACACACAAATACGCAATCACTGCAGGATAGGTCAGGGTTGGTACCAATATTGCAGGGCTGAGGAACTTCAGGAAGGAGATGAACTCATGTTTTGGTTGTTGGATGGTGAAGGATTTATTAGACTAGTATCGAGACGCCATAGGGATTAG 378 0.4497 MGPGGLGDIQYPHDPEEVLGVPGGILWTTLVSRRQLSGRHGLVLPVRIVNGYLVQDQREIQIKIPNGQIQSLELVWNTQIRNHCRIGQGWYQYCRAEELQEGDELMFWLLDGEGFIRLVSRRHRD 125
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi111g00094 125 SUPERFAMILY DNA-binding pseudobarrel domain 28 122 IPR015300 -
Sebi111g00094 125 ProSiteProfiles B3 DNA-binding domain profile. 27 124 IPR003340 GO:0003677
Sebi111g00094 125 Gene3D - 26 122 IPR015300 -
Sebi111g00094 125 CDD B3_DNA 36 114 IPR003340 GO:0003677
Sebi111g00094 125 Pfam B3 DNA binding domain 35 116 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi111g00094 Sebi-Chr111 1643957 1644425 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Sebi111g00094 B3 8.5e-08 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi111g00094 - K11838 lja:Lj1g3v3386930.3 55.8398