Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi111g00089 ATGGGGAAATCTACCTCCTGCTTCAGACTAATCACATGTGGCGGCGATTCGGCGGAGAATGATGATTTCCAAGTATCTGAGATCAAGGATTCTAATGATAAACGTGGTTGGAGTTTCCGGAAGAAATCTGCAAGGCACCGTGTGCTTAGCAATACTGTCATAGCCGAGGCCCCATCTTCTGCTAATAATAAGGAGAGTTCAGAATGTGCTAATTTTAATTTTCAACCACTTCTTGAACCTAATGTTGTCGAGAAGATTTGCACAACAAATTTCTCTAATGAGAAGCCTCAGTTATCCTCCTTTGAAAGCTCACAAATGTCAGAAAGTAATGTCATTGAGACTGAGAGCAAGGTGGATGTGGATCCACCAGAGTCCGCTGTTATCATCATCCAGGCTGCAATCAGAGGGTTAATGGCTCAGAGAGAACTACTACAGCTTAAGAATGTAGTGAAATTGCAAGCTGCTGTTCGTGGGCACTTGGTCAGGAGGCATGCTGTAGGAACCTTACGTTGTGTTCAAGCCATTGCGAAAATGCAGGTCCTTGTGCGAGCTCGTCGTGCTCAGCAGTCACATCTGGAAAATCATTTATATCACAAGGATGGAAATGATTCCTCAAAAGCTTTGGGGAATGAAAATCACATGACCAAACCAAATATGATGTACACTTCAACTGAGAAGCTGCTTAGCAATAGGTTTGCTCGTCAGCTGTTGGAATCATCACCAAAGAACAAACCTATCCATGTCAAGTGTGATCCTTCTAAAGCTGATTCTGCATGGAAATGGTTGGAGAGGTGGATGTCTGTAACATCAAAAGATGTTGCCGAGTTAAAAAAAACTAATTCTTTGACAGATCAATCAGACAAAAGCAAAGACAGCACTTCTATTTGTCAATTAGAAACAGGTATTCCGCCTGAAGTCTTTCTCCAGTCAGCTGACTCAAAGCCCACTGTTGAGGATTCACCTCTGCTTTCTGAGGATGAAGAGAAGGTGATTACTTATGATGCCAGTAACTTAAAGTTGCATCCAAGCTGTCCCACATCATCTATTGTAAAAGAGGACGTGGAGCAGGTTCCTCCTGAAGAAATCATTGCATATGATGCTAAGGTAGCCTCAGCAGAAACTGATTCCTTCCAAAATGAAATATCAGCATCAGATGCAAGTGCACCAGAGCTTAATATTAATTCTCTTCATCAGAAGCCTGAAATTGATGATGACCAGCAAAAAAGATCTTTGAAAAGATTTGCCTCAGACCAACTAGAGGCCGAAGGAAAGAAACCTGTAAATGGATCAAGAAAGGTCAGTAATCCTGCATTTATTGCTGCACAGTCAAAATTTGAAGAGCTGAGTTCAATGGCTAATTCAGGTAGGACAAGCAGTGTGTCCTATCAAGACGCAGCAGTTGAATCACAAGGAGATACCTCTTTAGTCGGCACAGATACTGCATATAGATCAAAAGAGTTATCATCTGAAAATTCTGCTCCCTTTCTTTCAAGAGTTGGTGGTTCTGAATGTGGTACTGAACTCTCCATCTCTTCCACTCTTGATTCACCTGACGTATCAGAGGTTGGTGCTACGGAAAATGAGCAGCAGGATGCCAAAGATTTAGTAGAAGGGACTGGTAATCTTGAAAACAGGATAAACCATGATGATGAGGCCAATGTTCCATGTACCATTCCAGCCTCTAACTTAGCTACCTCTGTTTTGGATCAGTCAGAGATTGTTGATAACATCAATGGAAATATGGTTCACTCAGTGGTAGCTGTCAACTCTGAAGAGCCTACTACTAAGACTGAGATAAATACATCTGACCAGGAGAAAGAGCAGGCAGAGGCTATTGTTGTGCAAGGTTCCAGATCATCTCCAGAAGCTTCACCTAGAAGTCATATAACTGTCCCTGAATCACAAGGAACACCTTCGAGTCAGGTATCTATAAAACCTAAAAAGGGCAAAATCAACAAGACAGGATCCAACAATAAACACGGTACCCTCTCAGTGGGAAACAAATCACCTGCAAATGCAAATGATGATTCAGGTTCGAGAGGCAGTAGGGAGCAACTGCCTAAAGATCAGCGGAGTGGGAAGAGACGCAATTCCTTTGGCTTAGTAAAACCTGATCACATTGATCAAGAACCTAGAGATAGTAGTAGTAACAATAATTCTCTTCCCCATTTCATGCAAGCTACAGAATCTGCTAGGGCAAAGGTCAATGCTAATAACTCTCCTAGATCAAGTCCAGATGTGCATGAACGAGACATCCAAGTTAAGAAGAGACATTCCTTACCTGGTGCCACTGGTAGGCAGGTTTCTCCACGCATCCAACGATCAATGTCTCAGGCACAGCAGAGTGCAAAGGGAAACAGTGTACATCCTCCTCAAGGAAATTAA 2385 0.4252 MGKSTSCFRLITCGGDSAENDDFQVSEIKDSNDKRGWSFRKKSARHRVLSNTVIAEAPSSANNKESSECANFNFQPLLEPNVVEKICTTNFSNEKPQLSSFESSQMSESNVIETESKVDVDPPESAVIIIQAAIRGLMAQRELLQLKNVVKLQAAVRGHLVRRHAVGTLRCVQAIAKMQVLVRARRAQQSHLENHLYHKDGNDSSKALGNENHMTKPNMMYTSTEKLLSNRFARQLLESSPKNKPIHVKCDPSKADSAWKWLERWMSVTSKDVAELKKTNSLTDQSDKSKDSTSICQLETGIPPEVFLQSADSKPTVEDSPLLSEDEEKVITYDASNLKLHPSCPTSSIVKEDVEQVPPEEIIAYDAKVASAETDSFQNEISASDASAPELNINSLHQKPEIDDDQQKRSLKRFASDQLEAEGKKPVNGSRKVSNPAFIAAQSKFEELSSMANSGRTSSVSYQDAAVESQGDTSLVGTDTAYRSKELSSENSAPFLSRVGGSECGTELSISSTLDSPDVSEVGATENEQQDAKDLVEGTGNLENRINHDDEANVPCTIPASNLATSVLDQSEIVDNINGNMVHSVVAVNSEEPTTKTEINTSDQEKEQAEAIVVQGSRSSPEASPRSHITVPESQGTPSSQVSIKPKKGKINKTGSNNKHGTLSVGNKSPANANDDSGSRGSREQLPKDQRSGKRRNSFGLVKPDHIDQEPRDSSSNNNSLPHFMQATESARAKVNANNSPRSSPDVHERDIQVKKRHSLPGATGRQVSPRIQRSMSQAQQSAKGNSVHPPQGN 794
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi111g00089 794 MobiDBLite consensus disorder prediction 506 526 - -
Sebi111g00089 794 MobiDBLite consensus disorder prediction 681 712 - -
Sebi111g00089 794 MobiDBLite consensus disorder prediction 588 794 - -
Sebi111g00089 794 Pfam IQ calmodulin-binding motif 147 164 IPR000048 GO:0005515
Sebi111g00089 794 Pfam IQ calmodulin-binding motif 125 143 IPR000048 GO:0005515
Sebi111g00089 794 ProSiteProfiles IQ motif profile. 124 151 IPR000048 GO:0005515
Sebi111g00089 794 MobiDBLite consensus disorder prediction 613 680 - -
Sebi111g00089 794 Gene3D - 121 171 - -
Sebi111g00089 794 ProSiteProfiles IQ motif profile. 145 174 IPR000048 GO:0005515
Sebi111g00089 794 MobiDBLite consensus disorder prediction 713 743 - -
Sebi111g00089 794 SMART iq_5 145 166 IPR000048 GO:0005515
Sebi111g00089 794 SMART iq_5 122 144 IPR000048 GO:0005515
Sebi111g00089 794 MobiDBLite consensus disorder prediction 766 794 - -
Sebi111g00089 794 PANTHER IQ-DOMAIN 5-RELATED 1 768 - -
Sebi111g00089 794 MobiDBLite consensus disorder prediction 506 530 - -
Sebi111g00089 794 Pfam Protein of unknown function (DUF4005) 704 781 IPR025064 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi111g00089 Sebi-Chr111 1490754 1501050 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi111g00089 113 784 IQD Protein Family AT1G19870 39.327 8.80e-116 362
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi111g00089 - - gmx:100799424 1154.04