Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi111g00087 ATGCAGGTTAGGTTATTCTTATCTGAGGAATCTCCTTCACAAGTTGGGTTAAATTCTCAAGATCACCTCCAAGCAAAGATATCATTGCAGCATCCAGGAGGAGCAGGTTCTGATGACATTCTGCCTCCTGGATTTGAAGGAACTCATGCTTCAAGTCAGTTTGAGATAAAGCCTTCCCAAATACCTGTTATTAGGTGGATTAATCCACCAAAGATTGTGCTGAATCTCGCATGGCAAGTGGTGGCCGGGGAAGAAAGCAAAGAGGTAGAAGATCAACATCAAAGGGAGAGGAGAGTACTTGAAGCTATTTATCCTCGCATATCTTCAATTCCTCCAAACCCTGCTGTTTCAATGGATGTTGAAAATTCCCATTACATTGATGGTCAAACTACTTTGATACCAATTACACCTATTGAAGATGAAGATGCGGCAGCAGATATAGTATCTGATTCCTTGGAACGGCAGTCTGTCGAATTACCTCCTGGTATATTGAAGGGTTCAAATTCTGCTACAAGTATCCAGTTACCTCATGGTCTAGTGTCTGATGTAGCTGCTGCATCTGTTGCTTTAACTAACATAGTGAAGAGCAATGAGCATGGAAATTTGATTGACCATGAATTACTAAAAAATATTCTCAACAATCCAGAAGTAATTGAGAAGTTGGTTAGAGATTATGGAGTTACTAATAATTCACTGCATGTACATAATGTGGGATCATCTTCAGTAGCTTTTTCACATCCTCCTATTCCTATTAATCAGGGAGAAACCACTACACCTTCACCAGTTGCTTTTTCAGCCACTTCCTATAATCACCCAACTGGAGGTCAGGTGGCAACTGTTTCTAGCCAATGGCATACTAGACCTGCAGTGAGTTCAGCTACTGTTTCTTCTTCTGCTGAGGTCCCTTCAACTAAAGATGTAAACTACTATAAGAGCTTAATTCAACAGCATGGAGGAGACAAACAAGAAACACTTCCATACTCCAGTAATCGTCAGATCCAGCAGCCAGTAACAAACTACGAGACACCATACAATATTAGAACAAAAGGGTCAAAACCAAAGATAATGAAGCCTTGTATCTTTTTTAACAGTTCTAGAGGATGTCGGAATGGTGCTAACTGTGCATACCAGCATGATGCATCATTTCAGCCACGAGGCAATAATGTATCAGGGATACAAAGTTCAAAGAGAATGAAAATGGATAATGAGATTAGCAGTTAA 1221 0.4021 MQVRLFLSEESPSQVGLNSQDHLQAKISLQHPGGAGSDDILPPGFEGTHASSQFEIKPSQIPVIRWINPPKIVLNLAWQVVAGEESKEVEDQHQRERRVLEAIYPRISSIPPNPAVSMDVENSHYIDGQTTLIPITPIEDEDAAADIVSDSLERQSVELPPGILKGSNSATSIQLPHGLVSDVAAASVALTNIVKSNEHGNLIDHELLKNILNNPEVIEKLVRDYGVTNNSLHVHNVGSSSVAFSHPPIPINQGETTTPSPVAFSATSYNHPTGGQVATVSSQWHTRPAVSSATVSSSAEVPSTKDVNYYKSLIQQHGGDKQETLPYSSNRQIQQPVTNYETPYNIRTKGSKPKIMKPCIFFNSSRGCRNGANCAYQHDASFQPRGNNVSGIQSSKRMKMDNEISS 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi111g00087 406 ProSiteProfiles Zinc finger C3H1-type profile. 353 381 IPR000571 GO:0046872
Sebi111g00087 406 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 6-RELATED 232 402 - -
Sebi111g00087 406 MobiDBLite consensus disorder prediction 385 406 - -
Sebi111g00087 406 MobiDBLite consensus disorder prediction 29 49 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi111g00087 Sebi-Chr111 1479265 1480852 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Sebi111g00087 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi111g00087 - - cam:101501814 603.208