Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi111g00081 ATGGTTTCTGTTGAAGAAAAAATCAAAACTATAGGAGGAGGAGGAGGAACAGTTGTTGGAGTTGAGTCTCTAGTTGCAGAGATGAAGCTGCTGAAGGAACATTCTGGGGTCCCAAAGAGTTTGAATTCGGAGTTATGGCATGCTTGCGCAGGCCCTCTTGTATCCTTGCCTCAGGTGGGAAGTCTTGCTTATTACTTCCCTCAGGGACATAGCGAGCAGGTGGCTGCTTCCACTAGAAGTACAGCGACCTCACAGATTCCTAACTATCCCAATCTTCCATCTCAGTTACTCTGCCAAGTCCAATATGTCACACTTCATGCAGACAAAGAAACAGACGAAATCTATGCTCAAATGTGCCTTCAACCACTGGATTCCGAAAAAGACATCTTTCCCATATCTGAGTTTGGGCTAAAACCCAGCAAGCATCCCAGTGAGTATTTCTGCAAGACTTTAACTGCTAGTGACACGAGCACACATGGTGGCTTTTCTGTACCACGCAGGGCAGCAGAAAAGCTCTTTCCTCCATTGGATTACACGACTCAACCACCAACCCAGGAACTTGTTGTCAGAGATTTGCATGATAATACCTGGACATTTCGACATATATACCGTGGTCAGCCAAAGAGACACCTTCTCACAACTGGTTGGAGTTTGTTTGTAGGCTTAAAAAGGCTTAAAGCAGGTGATTCTGTTCTTTTTATCAGGCGTGCTAATCGCCAACAGACATCACTTCCATCATCAGTGCTTTCTGCTGATAGTATGCACATTGGTGTGCTTGCTGCCGCAGCTCATGCTGCTGCTAATCGAAGTCCATTCAATATTTTCTACAATCCAAGAGCATGCCCTTCAGCATTTGTTATTCCACTAGCTAAATACCGAAAAGCTGTATATGAGACACAGCTCTCAGTTGGCTTGAGATTTGGTATGATGTTTGAGACAGAGGAATCAGGTAAGCGCAGATATATGGGTACAATTATAAGCATAAGTGATTTGGATCCTCTAAGGTGGCCTGGTTCTAAGTGGAGAAATATTCAGGTGGAGTGGGATGAGCCAGGGTGTAGTGATAAGCAGAATAGAGTTAGTTCATGGGACATTGAGACTCCTGAAAGTCTTTTCATCTTCCAGTCTTTGACTTCAAGTCTTAAACGGCCATTGCAATCTGGATTATTGGAAAACGAGTGGAACACTTTGTCAAGAAGACCTTTTATGCGAGTTCCTGAAAATGGAATTGTGGAGCTCACAAACACCATGCCAAATCTGTACTCAGAACAAATGTCGAAGCTTCTTTTTAAACCCCAACTTGTTAACAATGCTGGAAACTCTTTATGGGTCAGACAACAAGAATCTTCTGCTAAGAGAGGTCCCTTAGAAGAGGTGAATACCACACTGCCAATAGGTTATCAACAAGCTCATCTTGCAAGTTCAGTGAGCTTACCACAACCAAATCCACATTTTCAATCTGAACCAGACCAATCTAATACCTTGAACTTGCATCCACATTTGAAAAGTGATCAACTTGAAAAATTGTATCCTCCGGCTAAAATTGATAATCCTTTGTCTTCTGGAACAGTTACTGATAAGCCAAAATTAGAATCTGAGGTGTCTAGTGATGGTATATTTGACTACCCTTCCTTGGAAGGCTGCAACATTGAAAAAATGGCATTAAATCTTGTTAGCCCCCAAAGCCTTACAGACCAATTGACATTCCTTAATCAAAACCAGAGTCCATTGGTGGGTGATATTCCTCATTTAGACATTGATGAATGGATGATGTATTCTTCTTGGCAAACTCTTGTTGGGCAAAATGGATCAACTGGACCTCTAGCAGCTTTGCAAGAACAATCTGTGCTTCCCTCCCAAGCAGCTAATCTCCCTTTACCTTCTGTAAGCCAAGACATGTGGGGTCCTGCGAAAAATTTGAAGCTTTTACCTCAATCAGATCAGCTAACTTCCATCTCTCAGCAGCATAGCCTTAGTTGTATATCTACTAGTTCAAACAATTTGAGGGATCTATCAGCTGAGAGCAACAATCAAAGTGAAATTTACAACAGCTTCAATAATGTTGATGGTAATAAAAGTGTAAGTGCTACAATGGGTAATCCTTCTACTTCAAGTGCTATTTTGGATGAGTTTTGCAATTTCAAGGAAAGGAACTTCAAGAACCCATCAGATTGCATGCTGAGCAACTTAAGTACAAGCCAAGATGTCCAGTCTCAGATAACATCCACAAGTTTAGTAGAGTCACATGCCTTTTCAGTGCAGGAAATTCCTGACAACTCAGTTGGTGCATCTTCAAGCCATGTTGATTTTGATGAAAGCAGCATTCTGCAGAATAATTCATGGCCGCAAGTAGCTGCGCAGCCTGCACGTAGGCGTACCTACACAAAGGTGCAAAGGGCAGGTTCTGTAGGAAGATCAATTGATGTGACAACTTTCAAGAACTATGAGGAACTGATCCGAGCAATCGAATGCATGTTTGGACTGGAGGGTTTGCTGAATGACACTAGAGGTTCAGGATGGAAATTGGTGTATGTGGATTATGAGAATGATGTTCTGCTTGTGGGGGATGATCCTTGGGAGGAATTTGTGGGTTGCGTACGGTGCATCAGGATTTTGTCACCAACAGAAGTTCAGCAGATGAGTGAAGAGGGGATGAAGCTTCTAAATAGTGGTGCTTTTCAAGGGATCAATGGTTGCATGTCTGGTGGCTCTAGTTGA 2718 0.426 MVSVEEKIKTIGGGGGTVVGVESLVAEMKLLKEHSGVPKSLNSELWHACAGPLVSLPQVGSLAYYFPQGHSEQVAASTRSTATSQIPNYPNLPSQLLCQVQYVTLHADKETDEIYAQMCLQPLDSEKDIFPISEFGLKPSKHPSEYFCKTLTASDTSTHGGFSVPRRAAEKLFPPLDYTTQPPTQELVVRDLHDNTWTFRHIYRGQPKRHLLTTGWSLFVGLKRLKAGDSVLFIRRANRQQTSLPSSVLSADSMHIGVLAAAAHAAANRSPFNIFYNPRACPSAFVIPLAKYRKAVYETQLSVGLRFGMMFETEESGKRRYMGTIISISDLDPLRWPGSKWRNIQVEWDEPGCSDKQNRVSSWDIETPESLFIFQSLTSSLKRPLQSGLLENEWNTLSRRPFMRVPENGIVELTNTMPNLYSEQMSKLLFKPQLVNNAGNSLWVRQQESSAKRGPLEEVNTTLPIGYQQAHLASSVSLPQPNPHFQSEPDQSNTLNLHPHLKSDQLEKLYPPAKIDNPLSSGTVTDKPKLESEVSSDGIFDYPSLEGCNIEKMALNLVSPQSLTDQLTFLNQNQSPLVGDIPHLDIDEWMMYSSWQTLVGQNGSTGPLAALQEQSVLPSQAANLPLPSVSQDMWGPAKNLKLLPQSDQLTSISQQHSLSCISTSSNNLRDLSAESNNQSEIYNSFNNVDGNKSVSATMGNPSTSSAILDEFCNFKERNFKNPSDCMLSNLSTSQDVQSQITSTSLVESHAFSVQEIPDNSVGASSSHVDFDESSILQNNSWPQVAAQPARRRTYTKVQRAGSVGRSIDVTTFKNYEELIRAIECMFGLEGLLNDTRGSGWKLVYVDYENDVLLVGDDPWEEFVGCVRCIRILSPTEVQQMSEEGMKLLNSGAFQGINGCMSGGSS 905
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi111g00081 905 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 39 882 IPR044835 GO:0003677|GO:0006355|GO:0009725
Sebi111g00081 905 SUPERFAMILY DNA-binding pseudobarrel domain 137 265 IPR015300 -
Sebi111g00081 905 FunFam Auxin response factor 787 881 - -
Sebi111g00081 905 MobiDBLite consensus disorder prediction 476 497 - -
Sebi111g00081 905 CDD B3_DNA 146 233 IPR003340 GO:0003677
Sebi111g00081 905 Gene3D - 300 373 - -
Sebi111g00081 905 Pfam Auxin response factor 262 345 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Sebi111g00081 905 Gene3D - 788 881 - -
Sebi111g00081 905 ProSiteProfiles B3 DNA-binding domain profile. 147 252 IPR003340 GO:0003677
Sebi111g00081 905 SMART B3_2 147 252 IPR003340 GO:0003677
Sebi111g00081 905 Pfam B3 DNA binding domain 147 238 IPR003340 GO:0003677
Sebi111g00081 905 ProSiteProfiles PB1 domain profile. 792 876 IPR000270 GO:0005515
Sebi111g00081 905 Gene3D - 145 244 IPR015300 -
Sebi111g00081 905 FunFam Auxin response factor 145 244 - -
Sebi111g00081 905 FunFam Auxin response factor 300 372 - -
Sebi111g00081 905 MobiDBLite consensus disorder prediction 512 535 - -
Sebi111g00081 905 SUPERFAMILY CAD & PB1 domains 805 871 - -
Sebi111g00081 905 Pfam AUX/IAA family 785 878 IPR033389 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi111g00081 Sebi-Chr111 1443611 1448672 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi111g00081 23 897 B3 DNA Binding Superfamily AT1G19850 56.751 0.0 921
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Sebi111g00081 AUX_IAA 1e-10 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi111g00081 K14486 - gmx:100813003 1296.95