Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi111g00079 ATGTCTGGGAGACTCGGAAAATGCAGCAGAATCCGCCACATCGTGAGGCTCCGGCAAATGCTGCGGCGGTGGCGGAACAAGGCCCGCATGTCAGCACATCGAACACCGCCTGATGTTCCTGCGGGACACGTGGCGGTGTGCGTGGGCACCAACTACAAGAGATTTGTGGTGCGCGCAACCTACCTGAACCACCCCATCTTCGAGAAGCTACTGGTTCAGGCAGAGGAAGAGTACGGGTTCTCAAACAATGGTCCCCTCGCCATTCCCTGCGACGAACTGCTCTTCGAAGAGATCATCCGGTTTATTTCACGGTCCGGTTCGTCTGGCAACTCGACCCGGTTCGAGGACTTTCAAAGGTACTGCCACGCTGGCATCAAGAATAACAACATGGACTTATACCCTGAGTCTCGACCGCTACTCACTCACAAATAA 432 0.5509 MSGRLGKCSRIRHIVRLRQMLRRWRNKARMSAHRTPPDVPAGHVAVCVGTNYKRFVVRATYLNHPIFEKLLVQAEEEYGFSNNGPLAIPCDELLFEEIIRFISRSGSSGNSTRFEDFQRYCHAGIKNNNMDLYPESRPLLTHK 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi111g00079 143 Pfam Auxin responsive protein 16 101 IPR003676 GO:0009733
Sebi111g00079 143 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 27 98 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi111g00079 Sebi-Chr111 1391842 1392273 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi111g00079 5 140 Calmodulin-binding Proteins AT4G34750 53.103 4.81e-48 150
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi111g00079 K14488 - qsa:O6P43_018667 218.009