Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi1117g00002 ATGGAACGATCCTTACCTCTTGACAAGCATACCTTAGTAATCAATTTGGGGAATATGTTTGGTGAGGTTGTAGCTGTTATTGGTGATGGAACCAATGATGCTCCTGCACTTCATGAGTCAGACATTGGGCTTGCCATGGGGATAGCTGGAACCAAGGTTTATGTCTATTAA 171 0.4269 MERSLPLDKHTLVINLGNMFGEVVAVIGDGTNDAPALHESDIGLAMGIAGTKVYVY 56
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi1117g00002 56 Pfam haloacid dehalogenase-like hydrolase 15 53 - -
Sebi1117g00002 56 SUPERFAMILY HAD-like 3 53 IPR036412 -
Sebi1117g00002 56 Gene3D - 3 53 IPR023214 -
Sebi1117g00002 56 PANTHER CATION TRANSPORTING ATPASE 1 53 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi1117g00002 Sebi-Chr1117 55773 55943 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi1117g00002 1 53 Primary Pumps ATPases AT3G57330 84.906 9.14e-23 87.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi1117g00002 K01537 - ming:122088971 97.0561