Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi1117g00001 ATGATCCGAGCAGAGTTAGATCAAACTTTCATGGAAACCAAAAGGAACAAACAGCTTTGGGAAGTTATCTCCAATAAGATGAAGGAAAAGGGTTATCATAGAAGTGCAGAGCAGTGTAAGTGCAAGTGGAAAAACCTCGTTACTCGCTATAAGGGATGTGAAACGATGGAGCCAGAAGGGGTGAGGCAGCAATTTCCATTTTACAATGAACTTCAAGCGATTTTCACTTCAAGGATGCAGAGAATGTTGTGGGCTGAAGCTGAAGGAGGGTCTAAAAAGAAAGCGGAGATTCTAGAGGAGTTTATGAGGCAACAAATGCAAATGGAAGCTCAATGGATGGAAGCATATGAGGCAAGGGAGAGTGAGAGGAGGTTGAAGGAGATGGAATGGAGACAAACTATGGAAGCATTAGAGAATGAGAGGATAATGATGGACCAAAGATGGAGAGAAAGGGAAGAACAAAGAAGGATTAGAGAAGAAGCTAGGGCTGATAAGAGAGATGCTCTAATCACAGCTTTGCTTAACAAGCTAAGAAGAGAAGAGATGTAG 549 0.4226 MIRAELDQTFMETKRNKQLWEVISNKMKEKGYHRSAEQCKCKWKNLVTRYKGCETMEPEGVRQQFPFYNELQAIFTSRMQRMLWAEAEGGSKKKAEILEEFMRQQMQMEAQWMEAYEARESERRLKEMEWRQTMEALENERIMMDQRWREREEQRRIREEARADKRDALITALLNKLRREEM 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi1117g00001 182 ProSiteProfiles Myb-like domain profile. 5 47 IPR001005 -
Sebi1117g00001 182 PANTHER FI21293P1 2 178 - -
Sebi1117g00001 182 CDD GT1 1 54 - -
Sebi1117g00001 182 Gene3D - 1 52 - -
Sebi1117g00001 182 FunFam Zinc finger and SCAN domain-containing 20 1 52 - -
Sebi1117g00001 182 Pfam Myb/SANT-like DNA-binding domain 5 74 IPR044822 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi1117g00001 Sebi-Chr1117 39613 40692 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi1117g00001 2 91 Trihelix Transcription Factor Family AT5G01380 74.444 1.07e-45 151
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Sebi1117g00001 Myb_DNA-bind_4 4.7e-17 CL0123