Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi1115g00004 TGCCTTTCAGGAATTAATATGTTTAACATTTTGGATCGCTTTTGCGAAGATAATTCACAATTGTTGAGGAGATCTCTTTCTCAGGAGTTGAAGGTCTCTCTTAGTCCTCATCTCACGGTGCCAGAATTAAGCTGCCAAATTTATGGTTTTTTCCTCGCCACTAAATGGGCCAATGATGTGAGTGTTCGCAAGTCACTGCATATTCGAGAGGGAACTATAGGGGAATGGGAACGTTGTTACACTACTGATTTTAAGTTTGAGATCCCCAGTAGCTTTGAGTTTCATGTAAATCTCAGTGCAAAAGGCTACCGTTCCTTGATATACAGTGGAGATCATGATCTAGTTGTTCCTTTCATGTCTACTCAAGCGTGGATAAGGGCTCTAAACTACTCCATTGTGGAAGATTGGAGGCCATGGCTTGTTGATGGCCAAGTCGCAGGATACACAAGGACTTACTCGAATCGAATGACATTTGCTACTGTGAAGGGTTCAGGACATACAGCTCCTGAGTACAAGCCTGACGAAGGTTTTGCCATGTTCACTAGGTGGATATCTAGTAAGCCTTTGTAA 570 0.4263 CLSGINMFNILDRFCEDNSQLLRRSLSQELKVSLSPHLTVPELSCQIYGFFLATKWANDVSVRKSLHIREGTIGEWERCYTTDFKFEIPSSFEFHVNLSAKGYRSLIYSGDHDLVVPFMSTQAWIRALNYSIVEDWRPWLVDGQVAGYTRTYSNRMTFATVKGSGHTAPEYKPDEGFAMFTRWISSKPL 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi1115g00004 189 Gene3D alpha/beta hydrolase 3 188 IPR029058 -
Sebi1115g00004 189 FunFam Carboxypeptidase 92 186 - -
Sebi1115g00004 189 SUPERFAMILY alpha/beta-Hydrolases 5 188 IPR029058 -
Sebi1115g00004 189 Pfam Serine carboxypeptidase 3 185 IPR001563 GO:0004185|GO:0006508
Sebi1115g00004 189 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 4 173 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi1115g00004 Sebi-Chr1115 91217 92727 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi1115g00004 52 189 Calmodulin-binding Proteins AT2G22960 59.712 2.28e-60 184
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi1115g00004 K16296 - gmx:100780069 317.005