Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi1114g00003 ATGGTTCCCTCTCCCTGCTACTGTACCTTGTCTAAATCTGGAATTAATGTATTACACTTGCTTGCTGCACGTTCTTCATCCAGCACTGGTAAGGGAAAAAATCAAGAAGGCTCAATAAAGTATGGTTTCAGCCTAGTAAAAGGGAGAGCTAATCATCCAATGGAGGATTATCATGTTGCCAAGTTTGTGCAGATACAGGAGAAAGAATTGGGTTTATTTGCTATTTATGATGGTCATTTGGGTGACCGTGTACCTGCCTACTTACAGAAACATTTGTTTACCAACATTCTAAGGGAGGAGGAATTTTGGAATGACCCCACTCTTTCTATCTCAAAAGCATATGAGAGCACAGATCAAGCAATTCTGTCACACAGTTCTGATTTGGGGCATGGTGGATCAACAGCAGTAACTGCAATATTGATCAATGGGCGAAGGTTATGGATAGCAAATGTTGGAGACTCACGAGCTGTTCTTTCAAGAAAAGGTCAAGCAGTACAAATGACTACAGATCATGAACCAAGCACAGAACGAGGCAGCATTGAGAATAGAGGTGGTTTTGTCTCCAACTTACCAGGTGATGTGCCTAGAGTAAATGGGCAACTGGCTGTTTCTCGTGCATTTGGAGACAAGAGTCTCAAGTCACATTTGAGATCAGACCCTGATGTTCAGCATACCGACATAGATGCTGATATTGATATTCTAATCCTTGCAAGTGATGGACTTTGGAAGGTAATGGCTAATCAAGAGGCAGTGGATATTGCTAGAAGAATGAGAGACCCGCAGAAAGCAGCTAAGCAGTTAACAGCTGAAGCATTACAGAGAGACAGTAAAGATGATATATCTTGCGTTGTGGTTAAATTCAGGTGA 867 0.4187 MVPSPCYCTLSKSGINVLHLLAARSSSSTGKGKNQEGSIKYGFSLVKGRANHPMEDYHVAKFVQIQEKELGLFAIYDGHLGDRVPAYLQKHLFTNILREEEFWNDPTLSISKAYESTDQAILSHSSDLGHGGSTAVTAILINGRRLWIANVGDSRAVLSRKGQAVQMTTDHEPSTERGSIENRGGFVSNLPGDVPRVNGQLAVSRAFGDKSLKSHLRSDPDVQHTDIDADIDILILASDGLWKVMANQEAVDIARRMRDPQKAAKQLTAEALQRDSKDDISCVVVKFR 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi1114g00003 288 PANTHER PROTEIN PHOSPHATASE 33 287 IPR015655 GO:0004722|GO:0006470
Sebi1114g00003 288 Pfam Protein phosphatase 2C 49 280 IPR001932 -
Sebi1114g00003 288 Gene3D - 35 288 IPR036457 -
Sebi1114g00003 288 ProSiteProfiles PPM-type phosphatase domain profile. 40 287 IPR001932 -
Sebi1114g00003 288 FunFam Probable protein phosphatase 2C 39 31 288 - -
Sebi1114g00003 288 SMART PP2C_4 36 285 IPR001932 -
Sebi1114g00003 288 SMART PP2C_SIG_2 51 287 IPR001932 -
Sebi1114g00003 288 CDD PP2Cc 39 287 IPR001932 -
Sebi1114g00003 288 SUPERFAMILY PP2C-like 38 287 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi1114g00003 Sebi-Chr1114 61632 63510 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi1114g00003 36 288 PP2C-type Phosphatase Gene Family AT1G22280 76.062 4.76e-149 417
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi1114g00003 K17506 - gmx:100797292 480.715