Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi1110g00003 ATGTATGATTCTCTGAAACCAGTGGTTTTGGTTGGTGGAATGCATGATAACTTCTTTGCAAGTTTCTTTCTAGGATGGGGGATCACAATATTATCAACCAACATTGCCTATGGGGTTTGCATGGGAGTTTCTAGCAACTTAAGGATCCGGAGCACACTTGGAAATGAAAACTGGGGAGATATTGGTGCTCTACAGGTATTATTTGCTACTTTTCATTGTATTATGCAATATGCTGGATTGCCCAATCCCTTTGTTGAGGATTTAGTTGCTGATCATAGTTTACGCCTCCAAACAAGAAGAGTTACTCACCAAGTTGTATTGGCAAGTTCTGATCGAGAAAAATTGGCAAGTTCAATTGACAAATTTGCTCAAAACTTCACCAAAATTTTAGAGGTATGTTTCTCTTACTATCATGAGGCATACAACACTGATAAAATGGTTGCTACAGAGCAAGTTGCTAGCAAGGGAATGGTTCTTCTAAGCTATATTCATATGGTGTCTGAGAAGGTTTCTCTAGGATTTGAGCTAATGTGTAACTACCTGTCGAGAGACGTCACAACTAGCTTTGAGGTGTCTACGTCTGCTGATGTTATAACTTCGACTTCAGCTTCTTCAGTATCTGCAGTTTCTGAATCTTCTTCGTTGTTCTTGATGCATGATGTTGGCAAAAGCTCCACTACAAAATTGGTGTGGAAACCATCACGAGAACCTTTCAACTTCGGCAACTTCGGATCTTTGGATCCTCCCTTTTCTTGCAACCTCAAAATGGAAGAAGAAGGGAGGGGCGAGCTCTGTTGCGATTTGCCTTCTTCATCTACTCTGCAACATCTGAAGGAGATAGCATATCGGATTGATACCAACAAAACTCGCATTCTCAGCATTGATGGTGGAGATAGCAAATTCCTTCTAAATTATCGTCGTATTGGAAGAACGAGCTCACGGCCACCACTTCTCTGCCAAGAAGGAGTGGGTTCTCTTGAGATCGAAAGCGATGACACCTTTTCAGCCTTTGAAGATCGCTTTTCGGTTCCTACACTGCTTCAAGACTCTCTTCGCATTGCAGTTGAGGTGGTGATTGAAATGGAGGAAACTGGAATGGATGGTAGTGCACCTGTTAATCAATACTGGCACGAATTTTCGAAGTTTTTTCAATATTATTTGGAGAATAAGATAGCTCCCATATTAGTTACTGCTGCCAACAGAGGCATCGTTGTTCCTCTTCATGTGCAGAAGCTGTTTGATGTTGTGTCATCGAGGTCTTCAACACTTGTTTTCTTGGAGAGTTAA 1287 0.4141 MYDSLKPVVLVGGMHDNFFASFFLGWGITILSTNIAYGVCMGVSSNLRIRSTLGNENWGDIGALQVLFATFHCIMQYAGLPNPFVEDLVADHSLRLQTRRVTHQVVLASSDREKLASSIDKFAQNFTKILEVCFSYYHEAYNTDKMVATEQVASKGMVLLSYIHMVSEKVSLGFELMCNYLSRDVTTSFEVSTSADVITSTSASSVSAVSESSSLFLMHDVGKSSTTKLVWKPSREPFNFGNFGSLDPPFSCNLKMEEEGRGELCCDLPSSSTLQHLKEIAYRIDTNKTRILSIDGGDSKFLLNYRRIGRTSSRPPLLCQEGVGSLEIESDDTFSAFEDRFSVPTLLQDSLRIAVEVVIEMEETGMDGSAPVNQYWHEFSKFFQYYLENKIAPILVTAANRGIVVPLHVQKLFDVVSSRSSTLVFLES 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi1110g00003 428 Pfam Eukaryotic porin 133 189 IPR027246 GO:0005741|GO:0055085
Sebi1110g00003 428 PANTHER KINASE FAMILY PROTEIN 42 133 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi1110g00003 Sebi-Chr1110 73984 75887 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi1110g00003 1 30 Antiporters AT4G28390 76.667 2.26e-08 53.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi1110g00003 - - gmx:100801137 94.3597